Job Description P39358 Confidence 17.07% Date Thu Jan 5 11:59:48 GMT 2012 Rank 74 Aligned Residues 106 % Identity 16% Template c1p1dA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:glutamate receptor interacting protein; PDBTitle: structural insights into the inter-domain chaperoning of2 tandem pdz domains in glutamate receptor interacting3 proteins Resolution UNK

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		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.			.	.
Predicted Secondary structure																																.																																													.	.			.
Query SS confidence																																.																																													.	.			.
Query Sequence		S	E	K	S	A	I	Y	D	I	K	H	D	K	I	K	A	G	D	I	L	V	I	I	G	V	G	P	S	G	T	.	G	M	E	E	T	Y	Q	V	T	S	A	L	K	H	L	S	Y	G	K	H	V	S	L	I	T	D	A	R	F	S	G	V	S	T	G	A	C	I	G	H	V	G	P	E	.	.	A	L	.
Query Conservation																																.																																													.	.			.
Alig confidence											.	.																				.																																													.	.			.
Template Conservation											.	.
Template Sequence		T	F	E	E	A	N	Q	L	L	.	.	R	D	S	S	I	T	S	K	V	T	L	E	I	E	F	D	V	A	E	S	V	I	P	S	S	G	T	F	H	V	K	L	P	K	K	H	S	V	E	L	G	I	T	I	S	S	P	S	S	R	K	P	G	D	P	L	V	I	S	D	I	K	K	G	S	V	A	H	R
Template Known Secondary structure											.	.		T			S	S	S										S		S			B			S	S										S	S										S		S	S	S	T	T										S	S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	G	P	I	G	K	L	R	T	G	D	L	I	E	I	K	I	D	C	R	E	L	H	G	E	V	N	F	L	G	T	R	S	D	E	Q	L	P	S	Q	E	E	A	T	A	I	L	N	A
Query Conservation
Alig confidence					.	.	.	.								.									.				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.								.									.				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	T	.	.	.	.	L	E	L	G	D	K	L	.	L	A	I	D	N	I	R	L	.	D	S	C	.	.	.	.	.	.	.	.	.	.	.	.	S	M	E	D	A	V	Q	I	L	Q	Q
Template Known Secondary structure		T	S		.	.	.	.			T	T				.				T	T			G	.	G	G		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.								.									.				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170					.	.	.	.	.	.	.		.	.	180	.	.	.	.	.		.	.	.													.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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