Job Description P39358 Confidence 15.39% Date Thu Jan 5 11:59:48 GMT 2012 Rank 86 Aligned Residues 53 % Identity 23% Template c1obyB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the complex of pdz2 of syntenin with2 a syndecan-4 peptide. Resolution 1.85 Å

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		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.			.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		D	A	R	F	S	G	V	S	T	G	A	C	I	G	H	V	G	P	E	.	.	A	L	A	G	G	P	I	G	K	L	R	T	G	D	L	I	E	I	K	I	D	C	R	E	L	H	G	E	V	N	F	L	G	T	R	S	D	E	Q	L	P	S	Q	E	E	A	T	A	I	L	N	A
Query Conservation																					.	.
Alig confidence																					.	.						.	.	.	.								.									.				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.								.									.				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	H	V	G	F	I	F	K	N	G	K	I	T	S	I	V	K	D	S	S	A	A	R	N	G	.	.	.	.	L	L	T	E	H	N	I	.	C	E	I	N	G	Q	N	V	.	I	G	L	.	.	.	.	.	.	.	.	.	.	.	.	K	D	S	Q	I	A	D	I	L	S	T
Template Known Secondary structure		T	S			S					T	T							T	T	S						T	.	.	.	.			S	S				.				T	T				.	T	T		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.								.									.				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.		.	240	.	.	.	.	.	.		.	.	.													250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions