Job Description P0C0K3 Confidence 99.92% Date Thu Jan 5 11:29:52 GMT 2012 Rank 21 Aligned Residues 224 % Identity 12% Template c3r78B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminoglycoside 3'-phosphotransferase apha1-iab; PDBTitle: crystal structure of the aminoglycoside phosphotransferase aph(3')-ia,2 atp-bound Resolution 2.40 Å

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		35	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		N	S	Y	E	N	R	V	Y	Q	F	Q	D	.	E	D	R	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	V	A	A	P	V	A	F	N	G	Q	T	L	L	N	H	Q	G	F	Y	F	A	V	F	P	S	V	G	G	R	Q
Query Conservation														.
Alig confidence														.															.	.																.												.	.	.	.	.
Template Conservation																													.	.																.												.	.	.	.	.
Template Sequence		G	Q	S	G	A	T	I	Y	R	L	Y	G	K	P	N	A	P	E	L	F	L	K	H	G	K	G	S	.	.	V	A	N	D	V	T	D	E	X	V	R	L	N	W	L	.	T	A	F	X	P	L	P	T	I	K	H	.	.	.	.	.	F	I	R	T	P	D	D	A	W	L	L	T	T	A	I	P	G	K	T
Template Known Secondary structure				S	S										T	T	S										T		.	.																.	T	T	T	S								.	.	.	.	.					S	S											S
Template Predicted Secondary structure																													.	.																.												.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		114								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.
Query Sequence		F	.	.	.	.	.	.	.	E	A	D	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	L	N	E	Y	L	I	E	P	R	K	L	F	E	D	A	T	L	I	P	S	G	L	K	A	A	F	L	K	A	T	D	E	L	I	A	A	V	T
Query Conservation			.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.																												.	.
Template Conservation																																					.	.
Template Sequence		A	F	Q	V	L	E	E	Y	P	D	S	G	E	N	I	V	D	A	L	A	V	F	L	R	R	L	H	S	I	P	V	C	N	C	P	.	.	F	N	S	D	R	V	F	R	L	A	Q	A	Q	S	R	X	N	N	G	L	V	D	A	S	D	F	D	D	E	R	N	G	W	P	V	E	Q	V	W	K	E	X	H
Template Known Secondary structure										G	G	G																		S		G	G	G			.	.		B																T	T				G	G	G			G	G	G	T	T
Template Predicted Secondary structure																																					.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		A	H	W	R	E	D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	.	.	P	M	F	V	D	L	D	D	A	R	N	G	P	A	V	Q	D	L	W	M	L	L	N	G	D	K	A	E	Q	R	M	Q	L	E	T	I	I	E	A	Y	E	E	F	S	E	F	D	T	A	E	I	G
Query Conservation																												.	.
Alig confidence																												.	.																																														.
Template Conservation																																																																											.
Template Sequence		K	L	L	P	F	S	P	D	S	V	V	T	H	G	D	F	S	L	D	N	L	I	F	D	E	G	K	L	I	G	C	I	D	V	G	R	V	G	I	A	D	R	Y	Q	D	L	A	I	L	W	N	C	L	G	E	F	S	P	S	L	Q	K	R	L	F	Q	K	Y	G	I	D	N	P	.	D	X	N	K	L	Q
Template Known Secondary structure		T	T												S				G	G	G					T	T									T	T						T												T	T	T													T		S	S		.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.
		265	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	E	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	H	L	X	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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