Job Description P0C0K3 Confidence 99.93% Date Thu Jan 5 11:29:52 GMT 2012 Rank 14 Aligned Residues 266 % Identity 13% Template c3mesB_ PDB info PDB header:transferase Chain: B: PDB Molecule:choline kinase; PDBTitle: crystal structure of choline kinase from cryptosporidium2 parvum iowa ii, cgd3_2030 Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure							.																.	.	.
Query SS confidence							.																.	.	.
Query Sequence		G	L	T	P	L	.	N	S	Y	E	N	R	V	Y	Q	F	Q	D	E	D	R	.	.	.	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	V	A	A	P	V	A	F	N	G	Q	T	L	L	N	H	Q	G	F	Y	F	A	V
Query Conservation							.																.	.	.
Alig confidence							.																.	.	.												.	.																					.											.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.																					.											.	.	.	.	.	.	.	.	.
Template Sequence		E	V	K	Q	I	F	S	G	L	T	N	Q	L	F	V	V	S	I	V	N	E	L	K	H	P	R	I	L	F	R	I	Y	G	K	H	.	.	V	F	Y	D	S	K	V	E	L	D	V	F	R	Y	L	S	N	I	N	I	.	A	P	N	I	I	A	D	F	P	E	.	.	.	.	.	.	.	.	.	G	R	I
Template Known Secondary structure										S	S	S														S											.	.																		T	T	S	.	S								T	T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.																					.											.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.										.	140	.
		106	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure													.	.	.																																	.	.	.	.	.	.	.
Query SS confidence													.	.	.																																	.	.	.	.	.	.	.
Query Sequence		F	P	S	V	G	G	R	Q	F	E	A	.	.	.	D	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	.	.	.	.	.	.	.	L	N	E	Y	L	I	E	P	R	K	L	F	E	D	A	T	L	I	P	S	G	L	K	A	A	F	L
Query Conservation													.	.	.																																	.	.	.	.	.	.	.
Alig confidence													.	.	.																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	F	I	D	G	E	P	L	T	T	K	Q	L	Q	L	T	H	I	C	V	E	V	A	K	N	M	G	S	L	H	I	I	N	S	K	R	A	D	F	P	S	R	F	D	K	E	P	I	L	F	K	R	I	Y	L	W	R	E	E	A	K	I	Q	V	S	K	N	N	Q	I	D	K	E	L	Y	S	K	I	L
Template Known Secondary structure							S					T	T	G	G	G	S																G	G	G	T	S		T	T	S		T	T	S			S																				T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.														190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		K	A	T	D	E	L	I	A	A	V	T	A	H	W	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	.	P	M	F	V	D	L	D	D	A	R	N	G	P	A	V	Q	D	L	W	M	L	L	N	G	D	K	A	E	Q
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		E	E	I	D	Q	L	E	E	L	I	M	G	G	E	K	F	S	M	E	R	A	L	E	L	K	L	Y	S	P	A	F	S	L	V	F	A	H	N	D	L	Q	E	N	N	L	L	Q	T	Q	N	N	I	R	M	I	D	Y	E	Y	S	A	I	N	F	A	G	A	D	I	A	N	Y	F	C	E	Y	I	Y	D	Y
Template Known Secondary structure				G	G	G						T	T	S	S												T	T		G	G	G							S				G	G	G					S	S								T	T																T	T	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
																			242	.	.	.	.	.	.	.	250	.	.	.	.										.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	Q	L	E	T	I	I	E	A	Y	E	E	.	.	.	.	.	.	.	.	.	F	S	E	F	D	T	A	E	I	G	L	I	E	P	L	R	A	M	R	L	V	Y	Y	L	A	W	L	M	R	R	W	A	D	P	A	F	P	K	N	F	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		C	S	E	K	Q	P	Y	F	K	F	K	Y	E	D	Y	P	C	E	E	L	R	K	L	F	I	S	V	Y	L	S	Q	T	L	Q	E	Q	V	M	P	S	Q	Q	I	V	H	I	M	T	K	A	V	E	V	F	T	L	I	S	H	I	T	W	G	L	W	S	I	A	S	.	.	.	.	.	.	.	.	.	.	V
Template Known Secondary structure				S	S	T	T	S					G	G	G	S																				S				T	T	S													T																.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.											.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	T	G	E	D	Y	W	L	R	Q	T	A	T	F	I	E	Q	A	K	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	D	F	T	E	Y	A	N	T	R	F	T	H	Y	L	Q	K	K	K	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions