Job Description P0C0K3 Confidence 99.94% Date Thu Jan 5 11:29:52 GMT 2012 Rank 13 Aligned Residues 257 % Identity 13% Template c3lzhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aph(2")-id/aph(2")-iva; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(2")-2 id/aph(2")-iva Resolution 2.00 Å

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		14	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		D	T	I	M	D	A	L	F	E	H	.	.	G	I	R	V	D	S	G	L	T	P	L	N	S	Y	E	N	R	V	Y	Q	F	Q	D	E	D	R	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	V	A	A	P	V	A	F	N
Query Conservation												.	.
Alig confidence												.	.																						.	.	.	.													.																				.
Template Conservation																																			.	.	.	.													.																				.
Template Sequence		D	Q	V	E	E	A	I	E	Q	L	Y	P	D	F	T	I	N	T	I	E	I	S	G	E	G	N	D	C	I	A	Y	E	I	.	.	.	.	N	G	N	F	I	F	K	F	P	K	H	S	.	R	A	S	I	N	L	L	N	E	V	T	V	L	K	T	I	H	N	E	.	L	S	L	P	I	P	E	V	V	F
Template Known Secondary structure													T	T													S	S							.	.	.	.	T	T	T							S	S		.																	T	T		.	S	S	S
Template Predicted Secondary structure																																			.	.	.	.													.																				.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	T	L	L	N	H	Q	G	F	Y	F	A	V	F	P	S	V	G	G	R	Q	F	E	.	.	.	.	.	.	.	.	.	A	D	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	L	N	E	Y	L	I	E	P	R	K	L	F	E	D
Query Conservation																										.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																																							.	.
Template Sequence		T	G	X	P	S	E	X	C	Q	X	S	F	A	G	F	T	K	I	K	G	V	P	L	T	P	L	L	L	K	N	L	P	K	Q	S	Q	D	Q	A	A	K	D	L	A	R	F	L	S	E	L	H	S	I	.	.	N	I	S	G	F	K	S	N	L	V	L	D	F	R	E	K	I	N	E	D	N	K	K	I	K
Template Known Secondary structure							S	S		S		S																				S																						S	.	.			T	T	S		G	G	G	B
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		A	T	L	I	P	S	G	L	K	A	A	F	L	K	A	T	D	E	L	I	A	A	V	T	A	H	W	R	E	D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	.	.	.	.	P	M	F	V	D	L	D	D	A	R	N	G	P	A	V	Q	D	L	W	M	L	L	N	G	D	K
Query Conservation																																																				.	.	.	.
Alig confidence																																																				.	.	.	.
Template Conservation
Template Sequence		K	L	L	S	R	E	L	K	G	H	Q	X	K	K	V	D	D	F	Y	R	D	I	L	D	N	E	I	Y	F	K	Y	Y	P	C	L	I	H	N	D	F	S	S	D	H	I	L	F	D	T	E	K	N	T	I	C	G	I	I	D	F	G	D	A	A	I	S	D	P	D	N	D	F	I	S	L	X	E	D	D	E
Template Known Secondary structure				T	T	T	T	S																	T		G	G	G	T									S	S		S	G	G	G					T	T	T	T									T	T						T	T					T	T	B		T	T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	Q	R	M	Q	L	E	T	I	I	E	A	Y	E	E	F	S	E	F	D	T	A	E	I	G	L	I	E	P	L	R	A	M	R	L	V	Y	Y	L	A	W
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		E	Y	G	X	E	F	V	S	K	I	L	N	H	Y	K	.	.	H	K	D	I	P	T	V	L	E	K	Y	X	X	K	E	K	Y	W	S	F	E	K	I	I	Y
Template Known Secondary structure		S	B												T	T	.	.		S
Template Predicted Secondary structure																	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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