Job Description P0C0K3 Confidence 99.97% Date Thu Jan 5 11:29:52 GMT 2012 Rank 4 Aligned Residues 273 % Identity 14% Template c3i0oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spectinomycin phosphotransferase; PDBTitle: crystal structure of spectinomycin phosphotransferase,2 aph(9)-ia, in complex with adp and spectinomcyin Resolution 2.40 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.
Predicted Secondary structure																										.	.	.																																																		.
Query SS confidence																										.	.	.																																																		.
Query Sequence		L	H	P	D	T	I	M	D	A	L	F	E	H	G	I	R	V	D	S	G	L	T	P	L	.	.	.	N	S	Y	E	N	R	V	Y	Q	F	Q	D	E	D	R	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	.	V	A	A
Query Conservation																										.	.	.																																																		.
Alig confidence																										.	.	.													.															.	.	.	.	.																		.
Template Conservation																																									.															.	.	.	.	.
Template Sequence		I	Q	A	Q	Q	L	I	E	L	L	K	V	H	Y	G	I	D	I	H	T	A	Q	F	I	Q	G	G	A	D	T	N	A	F	A	Y	Q	A	D	S	.	E	S	K	S	Y	F	I	K	L	K	Y	G	Y	H	.	.	.	.	.	D	E	I	N	L	S	I	I	R	L	L	H	D	S	G	I	K	E	I	I	F
Template Known Secondary structure		S																								S				S	S	S									.	S	S											S	T	.	.	.	.	.														T	T			S	S
Template Predicted Secondary structure																																									.															.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		87	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure					.																													.	.
Query SS confidence					.																													.	.
Query Sequence		P	V	A	.	F	N	G	Q	T	L	L	N	H	Q	G	F	Y	F	A	V	F	P	S	V	G	G	R	Q	F	E	A	D	.	.	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	L	N	E	Y	L	I	E	P	R	K	L	F	E	D	A
Query Conservation					.																													.	.
Alig confidence					.																													.	.
Template Conservation
Template Sequence		P	I	H	T	L	E	A	K	L	F	Q	Q	L	K	H	F	K	I	I	A	Y	P	F	I	H	A	P	N	G	F	T	Q	N	L	T	G	K	Q	W	K	Q	L	G	K	V	L	R	Q	I	H	E	T	S	V	P	I	S	I	Q	Q	Q	L	R	K	E	I	Y	S	P	K	W	R	E	I	V	R	S	F	Y	N
Template Known Secondary structure						T	T	S		S	S				S	S	S												B	T	T	T	S																												T	T	S							S											T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.																170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Query Sequence		T	L	I	P	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	A	A	F	L	K	A	T	D	E	L	I	A	A	V	T	A	H	W	R	E	D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	.	.	P	M	F	V	D	L	D	D	A	R	N	G	P	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template Conservation
Template Sequence		Q	I	E	F	D	N	S	D	D	K	L	T	A	A	F	K	S	F	F	N	Q	N	S	A	A	I	H	R	L	V	D	T	S	E	K	L	S	K	K	I	Q	P	D	L	D	K	Y	V	L	C	H	S	D	I	H	A	G	N	V	L	V	G	N	E	E	S	I	Y	I	I	D	W	D	E	P	M	L	A	P	K
Template Known Secondary structure		T					S	S															T																						G	G	G						S			S	G	G	G					S	S	S								S							T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure												.	.																																						.
Query SS confidence												.	.																																						.
Query Sequence		V	Q	D	L	W	M	L	L	N	G	.	.	D	K	A	E	Q	R	M	Q	L	E	T	I	I	E	A	Y	E	E	F	S	E	F	D	T	A	E	I	G	L	I	E	P	L	R	A	M	R	.	L	V	Y	Y	L	A	W	L	M	R	R	W	A	D	P	A	F
Query Conservation												.	.																																						.
Alig confidence												.	.																					.																	.
Template Conservation																																		.
Template Sequence		E	R	D	L	M	F	I	G	G	G	V	G	N	V	W	N	K	P	H	E	I	Q	Y	F	Y	E	G	Y	G	E	I	N	.	V	D	K	T	I	L	S	Y	Y	R	H	E	R	I	V	E	D	I	A	V	Y	G	Q	D	L	L	S	R	N	Q	N	N	Q	S
Template Known Secondary structure						T	T	T	T			G	G	G		S																		.																														T	T		S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions