Job Description P0C0K3 Confidence 95.34% Date Thu Jan 5 11:29:52 GMT 2012 Rank 62 Aligned Residues 147 % Identity 17% Template c3g0eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: kit kinase domain in complex with sunitinib Resolution 1.60 Å

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		40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure									.	.	.	.	.	.																			.	.
Query SS confidence									.	.	.	.	.	.																			.	.
Query Sequence		R	V	Y	Q	F	Q	D	.	.	.	.	.	.	E	D	R	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	.	.	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	V	A	A	P	V	A	F	N	G	Q	T	L	L	N	H	Q	G	F	Y	F	A	V	F	P	S	V	G	G
Query Conservation									.	.	.	.	.	.																			.	.
Alig confidence									.	.	.	.	.	.																			.	.																	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.
Template Sequence		K	V	V	E	A	T	A	Y	G	L	I	K	S	D	A	A	M	T	V	A	V	K	M	L	K	P	S	A	H	L	T	E	R	E	A	L	M	S	E	L	K	V	L	S	Y	L	G	N	H	.	.	.	.	.	.	M	N	I	V	N	L	L	G	A	C	T	I	G	G	P	T	L	V	I	T	E	Y	C	C	Y
Template Known Secondary structure										S	S	S	S	T	T												T	T																							.	.	.	.	.	.	T	T	B									S	S	S	S									T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.
Template SS confidence
		602	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650							.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	F	E	A	D	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	L	N	E	Y	L	I	E	P	R	K	L	F	E	D	A	T	L	I	P	S	G	L	K	A	A	F	L	K	A	T	D	E	L	I	A	A	V	T	A	H	W	R	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	L	L	N	F	L	R	R	K	R	D	S	F	I	C	S	K	T	S	P	A	I	M	E	D	D	E	.	.	.	.	.	.	.	.	.	.	L	A	L	D	L	E	D	L	L	S	F	S	Y	Q	V	A	K	G	M	A	F	L	A	S	K	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.		B									G	G	G	G	S		S	S	S					B	T	T	B		.	.	.	.	.	.	.	.	.	.																									T	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.																										.	.	.
Template SS confidence
																676	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.											.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	.	.	P	M	F	V	D	L	D	D	A	R	N
Query Conservation																							.	.
Alig confidence		.	.	.	.																		.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	N	C	I	H	R	D	L	A	A	R	N	I	L	L	T	H	G	R	I	T	K	I	C	D	F	G	L	A	R	D
Template Known Secondary structure		.	.	.	.	T				S			S	G	G	G					T	T	T								G	G	G
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						787	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions