Job Description P0C0K3 Confidence 99.87% Date Thu Jan 5 11:29:52 GMT 2012 Rank 24 Aligned Residues 263 % Identity 16% Template c3f2rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:choline kinase alpha; PDBTitle: crystal structure of human choline kinase alpha in complex2 with hemicholinium-3 Resolution 2.35 Å

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		30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure							.																.	.	.	.	.	.	.	.
Query SS confidence							.																.	.	.	.	.	.	.	.
Query Sequence		G	L	T	P	L	.	N	S	Y	E	N	R	V	Y	Q	F	Q	D	E	D	R	.	.	.	.	.	.	.	.	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	V	A	A	P	V	A	F	N	G	Q	T	L	L	N	H	Q	G
Query Conservation							.																.	.	.	.	.	.	.	.
Alig confidence							.																.	.	.	.	.	.	.	.											.	.	.	.	.	.	.																	.											.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.																	.											.	.	.	.	.	.	.
Template Sequence		H	I	S	V	I	R	G	G	L	S	N	M	L	F	Q	C	S	L	P	D	T	T	A	T	L	G	D	E	P	R	K	V	L	L	R	L	Y	G	A	.	.	.	.	.	.	.	M	V	L	E	S	V	M	F	A	I	L	A	E	R	S	L	.	G	P	K	L	Y	G	I	F	P	Q	.	.	.	.	.	.	.
Template Known Secondary structure									S	S	S										T	T				S	S	S			S										.	.	.	.	.	.	.														T	T	S	.	S								T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.																	.											.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																																																													.
Query SS confidence																		.	.	.																																																													.
Query Sequence		F	Y	F	A	V	F	P	S	V	G	G	R	Q	F	E	A	.	.	.	D	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	L	N	E	Y	L	I	E	P	R	K	L	F	E	D	A	T	L	I	P	S	G	L	K	A	A	F	L	K	.
Query Conservation																		.	.	.																																																													.
Alig confidence		.	.															.	.	.																										.	.	.																																	.
Template Conservation		.	.																																											.	.	.
Template Sequence		.	.	G	R	L	E	Q	F	I	P	S	R	R	L	D	T	E	E	L	S	L	P	D	I	S	A	E	I	A	E	K	M	A	T	F	H	G	M	K	M	P	F	N	K	.	.	.	E	P	K	W	L	F	G	T	M	E	K	Y	L	K	E	V	L	R	I	K	F	T	E	E	S	R	I	K	K	L	H	K	L
Template Known Secondary structure		.	.														G	G	G	G	G	S																T				S	S			.	.	.	S																	T					S
Template Predicted Secondary structure		.	.																																											.	.	.
Template SS confidence
				203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
						177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.									210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.	.	.	.																																		.	.	.	.	.	.	.	.																																.	.	.	.
Query SS confidence		.	.	.	.																																		.	.	.	.	.	.	.	.																																.	.	.	.
Query Sequence		.	.	.	.	A	T	D	E	L	I	A	A	V	T	A	H	W	R	E	D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	.	.	.	.	.	.	.	.	R	D	G	P	M	F	V	D	L	D	D	A	R	N	G	P	A	V	Q	D	L	W	M	L	L	N	G	D	K	A	E	.	.	.	.
Query Conservation		.	.	.	.																																		.	.	.	.	.	.	.	.																																.	.	.	.
Alig confidence		.	.	.	.																																		.	.	.	.	.	.	.	.																																.	.	.	.
Template Conservation
Template Sequence		L	S	Y	N	L	P	L	E	L	E	N	L	R	S	L	L	E	S	T	P	S	P	V	V	F	C	H	N	D	C	Q	E	G	N	I	L	L	L	E	G	R	E	N	S	E	K	Q	K	L	M	L	I	D	F	E	Y	S	S	Y	N	Y	R	G	F	D	I	G	N	H	F	C	E	W	M	Y	D	Y	S	Y	E
Template Known Secondary structure			T	T															T	S									S			S	G	G	G					T	T	G	G	G		S	S		S							T	T																	T	T			T	T		S
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
															241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.													.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	M	Q	L	E	T	I	I	E	A	Y	E	E	F	S	E	.	.	.	.	.	.	.	.	.	.	.	.	F	D	T	A	E	I	G	L	I	E	P	L	R	A	M	R	L	V	Y	Y	L	A	W	L	M	R	R	W	A	D	P	A	F	P	K	N	F	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.
Template Sequence		K	Y	P	F	F	R	A	N	I	R	K	Y	P	T	K	K	Q	Q	L	H	F	I	S	S	Y	L	P	A	F	Q	D	F	E	N	L	S	T	E	E	K	S	I	I	K	E	E	M	L	L	E	V	N	R	F	A	L	A	S	H	F	L	W	G	L	W	S	I	V	Q	A	K	I	S	S	.	.	.	.	.	I
Template Known Secondary structure		S	T	T	S					G	G	G	S																				G	G	G	S																																								.	.	.	.	.	S
Template Predicted Secondary structure																																																																												.	.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.						.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	T	G	E	D	Y	W	L	R	Q	T	A	T	F	I	E	Q	A	K	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	G	Y	M	D	Y	A	Q	A	R	F	D	A	Y	F	H	Q	K	R	K	L
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions