Job Description P0C0K3 Confidence 99.95% Date Thu Jan 5 11:29:52 GMT 2012 Rank 6 Aligned Residues 269 % Identity 16% Template c3dxqB_ PDB info PDB header:transferase Chain: B: PDB Molecule:choline/ethanolamine kinase family protein; PDBTitle: crystal structure of choline/ethanolamine kinase family protein2 (np_106042.1) from mesorhizobium loti at 2.55 a resolution Resolution 2.55 Å

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		14	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		D	T	I	M	D	A	L	F	E	H	G	.	.	I	R	V	D	S	G	L	T	P	L	N	S	Y	E	N	R	V	Y	Q	F	Q	D	E	D	R	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	V	A	A	P	V	A	F	N
Query Conservation													.	.
Alig confidence													.	.																					.	.	.	.	.										.	.	.	.	.	.	.	.																	.
Template Conservation																																			.	.	.	.	.										.	.	.	.	.	.	.	.																	.
Template Sequence		D	E	A	R	A	K	L	A	A	I	P	X	L	A	G	Y	T	G	P	L	E	R	L	G	G	L	T	N	L	V	F	R	A	.	.	.	.	.	G	D	L	C	L	R	I	P	N	.	.	.	.	.	.	.	.	R	A	N	E	A	V	A	A	R	E	A	A	K	A	G	V	.	S	P	E	V	L	H	V	D
Template Known Secondary structure									T	T	S	G	G	G	T	T			S							S	S	S	S						.	.	.	.	.	T	T								.	.	.	.	.	.	.	.														T	T	S	.	S
Template Predicted Secondary structure																																			.	.	.	.	.										.	.	.	.	.	.	.	.																	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		G	Q	T	L	L	N	H	Q	G	F	Y	F	A	V	F	P	S	V	G	G	R	Q	F	E	A	.	.	.	.	.	D	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	L	N	E	Y	L	I	E	P	R	K	L	F	E	D	A	T	L	I
Query Conservation																											.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.																.	.	.	.	.																									.	.	.	.
Template Conservation					.	.	.	.	.	.	.																																													.	.	.	.
Template Sequence		P	A	T	.	.	.	.	.	.	.	G	V	X	V	T	R	Y	I	A	G	A	Q	T	X	S	P	E	K	F	K	T	R	P	G	S	P	A	R	A	G	E	A	F	R	K	L	H	G	S	G	A	V	F	P	.	.	.	.	F	R	F	E	L	F	A	X	I	D	D	Y	L	K	V	L	S	T	K	N	V	T
Template Known Secondary structure		T	T	T	.	.	.	.	.	.	.									T	T												S	T	T														T	S					S	.	.	.	.	S	B															T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.																																													.	.	.	.
Template SS confidence
		78	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		P	S	G	L	K	A	A	F	L	K	A	T	D	E	L	I	A	A	V	T	A	H	W	R	E	D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	.	P	M	F	V	D	L	D	D	A	R	N	G	P	A	V	Q	D	L	W	M	L	L	N	G	D	K	A	E	Q	R	M	Q	L
Query Conservation																																																.
Alig confidence																							.	.	.																							.																																.
Template Conservation																							.	.	.																																																							.
Template Sequence		L	P	A	G	Y	H	D	V	V	R	E	A	G	G	V	R	S	A	L	A	A	.	.	.	H	P	L	P	L	A	A	C	H	C	D	P	L	C	E	N	F	L	D	T	G	E	R	X	W	I	V	D	W	E	Y	S	G	X	N	D	P	L	W	D	L	G	D	L	S	V	E	G	K	F	N	A	N	Q	.	D
Template Known Secondary structure				T	T																	T	.	.	.	S									S				G	G	G					S	S								T	T																	T	T						.
Template Predicted Secondary structure																							.	.	.																																																							.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.												.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	I	I	E	A	Y	E	E	F	S	E	F	D	T	A	E	I	G	L	I	E	P	L	R	A	M	R	L	V	Y	Y	L	A	W	L	M	R	R	W	A	D	P	A	F	P	K	N	F	P	W	L	T	G	E	D	Y	.	.	.	.	.	.	.	.	.	.	.	W	L	R	Q	T	A	T	F	I	E
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		E	E	L	X	R	A	Y	F	G	.	G	E	A	R	P	A	E	R	G	R	V	V	I	Y	K	A	X	C	D	L	L	W	T	L	W	G	L	I	Q	L	A	N	D	N	P	V	D	D	F	R	A	Y	A	D	G	R	F	A	R	C	K	A	L	X	E	T	P	E	F	S	R	H	L	A	A	V	R	X
Template Known Secondary structure										T	.	S																															T	T			S	S																			S
Template Predicted Secondary structure											.
Template SS confidence
		223	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions