Job Description P0C0K3 Confidence 99.96% Date Thu Jan 5 11:29:52 GMT 2012 Rank 5 Aligned Residues 265 % Identity 14% Template c3dxpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative acyl-coa dehydrogenase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (reut_a1007) from ralstonia eutropha jmp134 at 2.32 a resolution Resolution 2.32 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		T	L	H	P	D	T	I	M	D	A	L	F	E	H	.	.	G	I	R	V	D	S	G	L	T	P	L	N	S	Y	E	N	R	V	Y	Q	F	Q	D	E	D	R	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	V	A	A	P
Query Conservation																.	.
Alig confidence																.	.																								.														.	.	.	.	.	.
Template Conservation																																									.														.	.	.	.	.	.
Template Sequence		R	F	D	T	E	A	L	E	A	W	X	R	Q	H	V	E	G	F	A	G	P	L	S	V	E	Q	F	K	G	Q	S	N	P	T	F	K	L	V	T	.	P	G	Q	T	Y	V	X	R	A	K	P	G	A	.	.	.	.	.	.	I	E	R	E	Y	R	V	X	D	A	L	A	G	T	D	V	P	V	A	K	X
Template Known Secondary structure																S	T	T															S								.	S	S												.	.	.	.	.	.												T	T	S	S	S
Template Predicted Secondary structure																																									.														.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.										.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	F	N	G	Q	T	L	L	N	H	Q	G	F	Y	F	A	V	F	P	S	V	G	G	R	Q	F	E	A	D	N	.	.	.	.	.	.	.	.	.	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	L	N	E	Y	L	I	E	P	R	K
Query Conservation																																	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																							.	.	.	.	.	.	.	.	.
Template Conservation									.	.
Template Sequence		Y	A	L	C	E	D	E	.	.	S	V	I	G	R	A	F	Y	I	X	E	F	V	S	G	R	V	L	W	D	Q	S	L	P	G	X	S	P	A	E	R	T	A	I	Y	D	E	X	N	R	V	I	A	A	X	H	T	V	D	Y	Q	A	I	G	L	G	D	Y	G	K	P	G	N	Y	F	Q	R	Q	I	E	R
Template Known Secondary structure								T	.	.	T	T	T	S	S											B					T	T		T	T																							S		T	T	T	T	T		T	T	S	S			S
Template Predicted Secondary structure									.	.
Template SS confidence
		103	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		L	F	E	D	A	T	L	I	P	S	G	L	K	A	A	F	L	K	A	T	D	E	L	I	A	A	V	T	A	H	W	R	E	D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	.	.	.	.	P	M	F	V	D	L	D	D	A	R	N	G	P	A	V	Q	D	L	W	M	L	L
Query Conservation																																																								.	.	.	.
Alig confidence																																.	.																							.	.	.	.
Template Conservation																																.	.
Template Sequence		W	T	K	Q	Y	K	L	S	E	T	E	S	I	P	A	X	D	S	L	X	D	W	L	P	Q	H	I	P	Q	E	.	.	D	A	D	L	T	S	I	V	H	G	D	Y	R	L	D	N	L	X	F	H	P	T	E	P	R	V	L	A	V	L	D	W	E	L	S	T	L	G	H	P	X	G	D	F	G	Y	H	C
Template Known Secondary structure												S												G	G	G				S	T	.	.	T	S	S							S	S		S	G	G	G					S	S	S	S									T	T														G
Template Predicted Secondary structure																																.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.																.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		N	G	D	K	A	E	Q	R	M	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	T	I	I	E	A	Y	E	E	F	S	E	F	D	T	.	A	E	I	G	L	I	E	P	L	R	A	M	R	L	V	Y	Y	L	A	W	L	M	R	R	W
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		X	S	W	H	I	A	P	G	Q	F	R	G	I	A	G	L	D	H	A	A	L	G	I	P	D	E	A	S	Y	R	K	L	Y	E	Q	R	T	G	R	P	I	T	G	D	W	N	F	Y	L	A	F	S	X	F	R	I	A	G	I	L	Q	G	I	X	K	R	V
Template Known Secondary structure		G	G	G	T	S		S	S	S	S				T	T	S						T																S	S				S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions