Job Description P0C0K3 Confidence 99.95% Date Thu Jan 5 11:29:52 GMT 2012 Rank 7 Aligned Residues 261 % Identity 20% Template c3csvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (yp_614837.1) from silicibacter sp. tm1040 at 2.15 a resolution Resolution 2.15 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	I	M	D	A	L	F	E	H	G	I	R	V	D	S	G	L	T	P	L	N	S	Y	E	N	R	V	Y	Q	F	Q	D	E	D	R	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	V	A	A	P	V	A	F	N	G	Q
Query Conservation
Alig confidence																				.	.	.	.	.	.	.																							.	.
Template Conservation																				.	.	.	.	.	.	.																							.	.
Template Sequence		D	E	I	R	D	F	L	A	T	H	G	Y	A	D	W	N	R	T	.	.	.	.	.	.	.	P	R	Y	Q	R	L	R	S	P	T	G	A	K	A	V	L	X	D	W	S	P	E	.	.	E	G	G	D	T	Q	P	F	V	D	L	A	Q	Y	L	R	N	L	D	I	S	A	P	E	I	Y	A	E	E	H	A
Template Known Secondary structure											T	T		T	T					.	.	.	.	.	.	.									T	T											T	T	.	.	T	T			S													T	T		B									T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.																							.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.								.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.																																														.
Query SS confidence																							.	.	.	.	.	.	.																																														.
Query Sequence		T	L	L	N	H	Q	G	F	Y	F	A	V	F	P	S	V	G	G	R	Q	F	.	.	.	.	.	.	.	E	A	D	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	L	N	E	Y	L	I	E	P	R	K	L	.	F	E	D	A	T	L
Query Conservation																							.	.	.	.	.	.	.																																														.
Alig confidence				.	.	.	.	.	.	.													.	.	.	.	.	.	.																																														.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		R	G	.	.	.	.	.	.	.	L	L	L	I	E	D	L	G	D	A	L	F	T	E	V	I	N	N	D	P	A	Q	E	X	P	L	Y	R	A	A	V	D	L	L	I	H	L	H	D	A	Q	T	P	E	L	A	R	L	D	P	E	T	L	S	E	X	T	R	L	A	F	S	E	Y	R	Y	A	I	L	G	D
Template Known Secondary structure		T	T	.	.	.	.	.	.	.									S		B									G	G	G																	T	S							B									T	T	T					T							S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		85	.								.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		I	P	S	G	L	K	A	A	F	L	K	A	T	D	E	L	I	A	A	V	T	A	H	W	R	E	D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	.	.	.	.	.	.	P	M	F	V	D	L	D	D	A	R	N	G	P	A	V	Q	D	L	W	M	L	L	N	G	D	K	A
Query Conservation																																																	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.																							.	.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		A	A	E	D	N	R	K	R	F	E	H	R	F	A	Q	I	L	S	A	Q	.	.	.	.	.	L	E	G	D	X	V	F	V	H	R	D	F	H	A	Q	N	L	L	W	L	P	E	R	E	G	L	A	R	V	G	V	I	D	F	Q	D	A	K	L	G	H	R	A	Y	D	L	V	S	L	L	Q	D	A	R	R
Template Known Secondary structure																						.	.	.	.	.			S							S			S	G	G	G					T	T	S		G	G	G	G							T	T						T	T								S		T	T	S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure			.																								.	.	.	.
Query SS confidence			.																								.	.	.	.
Query Sequence		E	.	Q	R	M	Q	L	E	T	I	I	E	A	Y	E	E	F	S	E	F	D	T	A	E	I	.	.	.	.	G	L	I	E	P	L	R	A	M	R	L	V	Y	Y	L	A	W	L	M	R	R	W	A	D	P	A	F	P	K	N	F	P
Query Conservation			.																								.	.	.	.
Alig confidence			.																								.	.	.	.
Template Conservation
Template Sequence		D	V	P	A	Q	V	E	A	Q	X	I	D	H	Y	I	Q	A	T	G	V	D	E	S	H	F	R	S	A	Y	A	V	I	A	V	Q	R	N	X	R	I	L	G	I	F	A	R	L	S	Q	R	F	G	K	R	H	Y	I	E	F	V	P
Template Known Secondary structure																				T																															T	T			G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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