Job Description P0C0K3 Confidence 99.94% Date Thu Jan 5 11:29:52 GMT 2012 Rank 11 Aligned Residues 274 % Identity 11% Template c3c5iD_ PDB info PDB header:transferase Chain: D: PDB Molecule:choline kinase; PDBTitle: crystal structure of plasmodium knowlesi choline kinase, pkh_134520 Resolution 2.20 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.
Query Sequence		G	L	T	P	L	N	S	Y	E	N	R	V	Y	Q	F	Q	D	E	D	R	.	.	.	.	.	.	.	.	.	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	V	A	A	P	V	A	F	N	G	Q	T	L	L	N	H	Q	G
Query Conservation																						.	.	.	.	.	.	.	.	.
Alig confidence							.															.	.	.	.	.	.	.	.	.																																		.											.	.	.	.	.	.	.
Template Conservation							.																																																									.											.	.	.	.	.	.	.
Template Sequence		R	V	K	Q	I	.	L	L	T	N	Q	L	F	E	V	G	L	K	E	E	T	A	N	N	Y	N	S	I	R	T	R	V	L	F	R	I	Y	G	K	H	V	D	E	L	Y	N	T	I	S	E	F	E	V	Y	K	T	M	S	K	Y	K	I	.	A	P	Q	L	L	N	T	F	N	G	.	.	.	.	.	.	.
Template Known Secondary structure							.				S															S	T	T	S											T	T	G	G	G	T	S															T	T	S	.	S								T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure							.																																																									.											.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.								.	.	.	.	170
Predicted Secondary structure																		.	.	.																																																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.																																																		.	.	.	.	.	.	.
Query Sequence		F	Y	F	A	V	F	P	S	V	G	G	R	Q	F	E	A	.	.	.	D	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	L	N	E	Y	L	I	E	P	R	K	L	F	E	D	A	T	L	.	.	.	.	.	.	.	I	P	S	G	L
Query Conservation																		.	.	.																																																		.	.	.	.	.	.	.
Alig confidence		.	.															.	.	.																																																		.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	R	I	E	E	W	L	Y	G	D	P	L	R	I	D	D	L	K	N	P	T	I	L	I	G	I	A	N	V	L	G	K	F	H	T	L	S	R	K	R	H	L	P	E	H	W	D	R	T	P	C	I	F	K	M	M	E	K	W	K	N	Q	L	F	K	Y	K	N	I	E	K	Y	N	C	D	I	H	K
Template Known Secondary structure		.	.									S					G	G	G	G	G																	T					S				T	T	S			S															T	T	S	T	T	G	G	G	T		S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																												.																													.	.	.	.	.	.	.	.	.
Query SS confidence																																												.																													.	.	.	.	.	.	.	.	.
Query Sequence		K	A	A	F	L	K	A	T	D	E	L	I	A	A	V	T	A	H	W	R	E	D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	.	P	M	F	V	D	L	D	D	A	R	N	G	P	A	V	Q	D	L	W	M	L	L	N	G	D	K	A	E	.	.	.	.	.	.	.	.	.
Query Conservation																																												.																													.	.	.	.	.	.	.	.	.
Alig confidence																																												.																													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	I	K	E	S	D	K	F	I	K	F	M	K	V	Y	S	K	S	D	N	L	A	N	T	I	V	F	C	H	N	D	L	Q	E	N	N	I	I	N	T	N	K	C	L	R	L	I	D	F	E	Y	S	G	F	N	F	L	A	T	D	I	A	N	F	F	I	E	T	S	I	D	Y	S	V	S	S	Y	P	F	F
Template Known Secondary structure																	T	T	S			G	G	G							S			S	G	G	G					S	S								T	T																	T	T							S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
										241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.									260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Q	R	M	Q	L	E	T	I	I	E	A	Y	E	E	F	S	E	F	D	.	.	.	.	.	.	.	.	T	A	E	I	G	L	I	E	P	L	R	A	M	R	L	V	Y	Y	L	A	W	L	M	R	R	W	A	D	P	A	F	P	K	N	F	P	W	L	T	G	E	D	Y	W	L
Query Conservation		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																											.	.	.
Template Conservation																																																															.	.	.
Template Sequence		E	I	D	K	K	K	Y	I	S	Y	E	N	R	K	L	F	I	T	A	Y	L	S	N	Y	L	D	K	V	V	P	T	P	K	L	I	D	E	I	L	E	A	V	E	V	Q	A	L	G	A	H	L	L	W	G	F	W	S	I	I	R	G	.	.	.	Y	Q	T	K	S	Y	N	E	F	D	F	F	L	Y	A	E
Template Known Secondary structure					G	G	G	S																		S																																					.	.	.		S						S
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	T	A	T	F	I	E	Q	A	K	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	L	K	M	Y	D	D	Q	K	E	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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