Job Description P0C0K3 Confidence 100.00% Date Thu Jan 5 11:29:52 GMT 2012 Rank 3 Aligned Residues 250 % Identity 16% Template c2q83A_ PDB info PDB header:transferase Chain: A: PDB Molecule:ytaa protein; PDBTitle: crystal structure of ytaa (2635576) from bacillus subtilis at 2.50 a2 resolution Resolution 2.50 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		D	T	I	M	D	A	L	F	E	H	G	I	R	V	D	S	G	L	T	P	L	N	S	Y	E	N	R	V	Y	Q	F	Q	D	E	D	R	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	V	A	A	P	V	A	F	.	N	G
Query Conservation																																																																															.
Alig confidence															.	.	.	.																	.													.	.	.																													.
Template Conservation															.	.	.	.																	.													.	.	.
Template Sequence		E	L	A	E	N	V	L	Q	G	W	D	V	Q	.	.	.	.	A	E	K	I	D	V	I	Q	A	L	V	W	K	V	H	T	.	D	S	G	A	V	C	L	K	R	I	H	R	.	.	.	P	E	K	K	A	L	F	S	I	F	A	Q	D	Y	L	A	K	K	G	X	N	V	P	G	I	L	P	N	K	K	G
Template Known Secondary structure								G	G	G	S				.	.	.	.																	.	T	T										S	.	.	.																			T		S	S			B				T	T	S
Template Predicted Secondary structure															.	.	.	.																	.													.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	L	L	N	H	Q	G	F	Y	F	A	V	F	P	S	V	G	G	R	Q	F	E	A	D	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	.	.	.	.	.	.	.	.	.	.	L	N	E	Y	L	I	E	P	R	K	L	F	E	D
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	Y	S	K	H	G	S	F	L	F	V	V	Y	D	W	I	E	G	R	P	F	E	L	T	V	K	Q	D	L	E	F	I	X	K	G	L	A	D	F	H	T	A	S	V	G	Y	Q	P	P	N	G	V	P	I	F	T	K	L	G	R	W	P	N	H	Y	T	K	R	C	K	Q	X	E	T	W	K	L	X	A
Template Known Secondary structure			S					T	T												B				T	T	S																			T	T					T	T					B		T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.														.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		A	T	L	I	P	S	G	L	K	A	A	F	L	K	A	T	D	E	L	I	A	A	V	T	A	H	W	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	.	.	P	M	F	V	D	L	D	D	A	R	N	G	P	A	V
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		E	A	E	K	E	D	P	F	S	Q	L	Y	L	Q	E	I	D	G	F	I	E	D	G	L	R	I	K	D	R	L	L	Q	S	T	Y	V	P	W	T	E	Q	L	K	K	S	P	N	L	C	H	Q	D	Y	G	T	G	N	T	L	L	G	E	N	E	Q	I	W	V	I	D	L	D	T	V	S	F	D	L	P	I
Template Known Secondary structure					S	S																												T	T											S						S	S		S	T	T	S					G	G	G								T	T						T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		Q	D	L	W	M	L	L	N	G	D	K	.	.	.	.	A	E	Q	R	M	Q	L	E	T	I	I	E	A	Y	E	E	F	S	E	F	D	T	A	E	I	G	L	I	E	P	L	R	A
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		R	D	L	R	K	X	I	I	P	L	L	D	T	T	G	V	W	D	D	E	T	F	N	V	X	L	N	A	Y	E	S	R	A	P	L	T	E	E	Q	K	Q	V	X	F	I	D	X	L
Template Known Secondary structure												T			S	S																		S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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