Job Description P0C0K3 Confidence 99.89% Date Thu Jan 5 11:29:52 GMT 2012 Rank 22 Aligned Residues 220 % Identity 14% Template c2pywA_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: structure of a. thaliana 5-methylthioribose kinase in complex with adp2 and mtr Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.											.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.									.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.												.																															.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.												.																															.	.	.	.	.	.	.	.
Query Sequence		F	T	F	Q	T	L	H	P	D	T	I	M	D	A	L	F	E	H	.	.	.	.	.	.	.	.	.	.	G	I	R	V	D	S	G	L	T	P	L	.	N	S	Y	E	N	R	V	Y	Q	F	Q	D	E	D	R	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	.	.	.	.	.	.	.	.	D	Q
Query Conservation																				.	.	.	.	.	.	.	.	.	.												.																															.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.												.													.																		.	.	.	.	.	.	.	.
Template Conservation																																																						.
Template Sequence		E	E	F	T	P	L	N	E	K	S	L	V	D	Y	I	K	S	T	P	A	L	S	S	K	I	G	A	D	K	S	D	D	D	L	V	I	K	E	V	G	D	G	N	L	N	F	V	F	I	V	V	G	.	S	S	G	S	L	V	I	K	Q	A	L	P	Y	I	R	C	I	G	E	S	W	P	M	T	K	E	R
Template Known Secondary structure			S						T	T								T									T	T	T	T													S	S	S									.	S	S										S	B		T	T	T		T	T	S	B			T	T
Template Predicted Secondary structure																																																						.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.									.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure															.																																				.	.	.	.	.	.	.	.
Query SS confidence															.																																				.	.	.	.	.	.	.	.
Query Sequence		I	L	E	E	H	Q	F	A	L	Q	L	V	N	.	D	E	V	P	V	A	A	P	V	A	F	N	G	Q	T	L	L	N	H	Q	G	F	Y	F	A	V	F	P	S	V	G	G	R	Q	F	.	.	.	.	.	.	.	.	E	A	D	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R
Query Conservation															.																																				.	.	.	.	.	.	.	.
Alig confidence															.																.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.
Template Sequence		A	Y	F	E	A	T	T	L	R	K	H	G	N	L	S	P	D	H	V	P	E	V	Y	H	F	D	R	T	M	.	.	.	.	.	.	.	A	L	I	G	M	R	Y	L	E	P	P	H	I	I	L	R	K	G	L	I	A	G	I	E	Y	P	F	L	A	D	H	M	S	D	Y	M	A	K	T	L	F	F	T	S
Template Known Secondary structure																S	G	G	G	S								T	T	T	.	.	.	.	.	.	.	T									T	T											T				T	T															T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.								.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Query Sequence		K	Q	L	F	I	H	R	P	T	I	G	L	N	E	Y	L	I	E	P	R	K	L	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	T	L	I	P	S	G	L	K	A	A	F	L	.	.	.	.	.	K	A	T	D	E	L	I	A	A	V	T	A	H	W	R	E	D	F	T	V	L	R
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.																	.
Template Conservation																																																																												.
Template Sequence		L	L	Y	H	D	T	T	E	H	R	R	A	V	T	E	F	C	G	N	V	E	L	C	R	L	T	E	Q	V	V	F	S	D	P	Y	R	V	S	T	F	N	R	W	T	S	P	Y	L	D	D	D	A	K	A	V	R	E	D	S	A	L	K	L	E	I	A	E	L	K	S	M	F	C	E	.	R	A	Q	A	L
Template Known Secondary structure		T	T	T	S													G	G	G											T	T	T	G	G	G	S			T	T				S	T	T	T	T								T	T																		.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	.	P	M	F	V	D	L	D	D	A	R	N	G	P	A	V	Q	D	L	W	M	L	L
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		I	H	G	D	L	H	T	G	S	V	M	V	T	Q	D	S	T	Q	V	I	D	P	E	F	S	F	Y	G	P	M	G	F	D	I	G	A	Y	L
Template Known Secondary structure				S			S	G	G	G					S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions