 |
Job Description | P0C0K3 | Confidence | 32.07% | Date | Thu Jan 5 11:29:52 GMT 2012 |
Rank | 194 | Aligned Residues | 58 |
% Identity | 16% | Template | c1ua2A_ |
PDB info |
PDB header:cell cycle, transferase | Chain: A: PDB Molecule:cell division protein kinase 7; |
PDBTitle: crystal structure of human cdk7
|
Resolution | 3.02 Å |
|
 |
  |   |
41 | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
Predicted Secondary structure |   |
 |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | Y | Q | F | Q | . |
D | E | D | R | R | R | F | V | V | K | F | Y | R | P | E | R | W | T | A | D | Q | I | L | E | E | H | Q | F | A | L | Q | L | V | N | D | E | V | P | V | A | A | P | V | A | F | N | G | Q | T | L | L | N | H | Q | G | F | Y | F | A | V | F | P | S | V | G | G |
Query Conservation |   |
|
|   |
|   | . |   |   |
|
|   |   |   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   | . | . | . | . | . | . |   |   |   |   |   |
|
|   |
|
|   |   |
| . | . |   |
|
|
|
|
|   |
|   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
V | Y | K | A | R | D | K | N | T | N | Q | I | V | A | I | K | K | I | N | . |
. |
. |
. |
. |
. |
R | T | A | L | R | E | I | K | L | L | Q | E | L | . |
. |
S | H | P | N | I | I | G | L | L | D | . |
. |
. |
. |
. |
A | F | G | H | K | S | N | I | S | L | V | F | D | F | M | E | T |
Template Known Secondary structure |   |
 |  |  |  |  |
| S | S |
|
| S |  |  |  |  |  |  |
|
| . | . | . | . | . | . | T |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
| T | T | B |
|
|  |  |  | . | . | . | . | . |  |  |
|
| T | T |
|
|  |  |  |  |  |
|
| S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
. | . | 60 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|