Job Description P0C0K3 Confidence 99.92% Date Thu Jan 5 11:29:52 GMT 2012 Rank 19 Aligned Residues 275 % Identity 13% Template c1nw1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:choline kinase (49.2 kd); PDBTitle: crystal structure of choline kinase Resolution 2.02 Å

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		30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure							.																.	.	.	.	.	.	.	.
Query SS confidence							.																.	.	.	.	.	.	.	.
Query Sequence		G	L	T	P	L	.	N	S	Y	E	N	R	V	Y	Q	F	Q	D	E	D	R	.	.	.	.	.	.	.	.	R	R	F	V	V	K	F	Y	R	P	E	R	W	T	A	D	Q	I	L	E	E	H	Q	F	A	L	Q	L	V	N	D	E	V	P	V	A	A	P	V	A	F	N	G	Q	T	L	L	N	H	Q	G
Query Conservation							.																.	.	.	.	.	.	.	.
Alig confidence							.																.	.	.	.	.	.	.	.										.																								.											.	.	.	.	.	.	.
Template Conservation																																								.																								.											.	.	.	.	.	.	.
Template Sequence		R	I	S	R	I	K	G	G	M	S	N	M	L	F	L	C	R	L	S	E	V	Y	P	P	I	R	N	E	P	N	K	V	L	L	R	V	Y	F	.	N	P	E	T	E	S	H	L	V	A	E	S	V	I	F	T	L	L	S	E	R	H	L	.	G	P	K	L	Y	G	I	F	S	G	.	.	.	.	.	.	.
Template Known Secondary structure										T	T										T	T	S			S	S	S			S									.	S																				T	T	S	.	S	S							T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.																								.											.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																		.	.	.																																																										.	.	.	.
Query SS confidence																		.	.	.																																																										.	.	.	.
Query Sequence		F	Y	F	A	V	F	P	S	V	G	G	R	Q	F	E	A	.	.	.	D	N	I	D	Q	M	E	A	V	G	R	Y	L	G	R	M	H	Q	T	G	R	K	Q	L	F	I	H	R	P	T	I	G	L	N	E	Y	L	I	E	P	R	K	L	F	E	D	A	T	L	I	P	S	G	L	K	A	A	.	.	.	.
Query Conservation																		.	.	.																																																										.	.	.	.
Alig confidence		.	.															.	.	.																																																										.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	R	L	E	E	Y	I	P	S	R	P	L	S	C	H	E	I	S	L	A	H	M	S	T	K	I	A	K	R	V	A	K	V	H	Q	L	E	V	P	I	W	K	E	P	D	Y	L	C	E	A	L	Q	R	W	L	K	Q	L	T	G	T	V	D	A	E	H	R	F	D	L	P	E	E	C	G	V	S	S
Template Known Secondary structure		.	.														T	T	G	G	G	S															T	T				S	S			S	S																		S		T	T							G	G	G	S
Template Predicted Secondary structure		.	.
Template SS confidence
				148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
				174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.	.																																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	F	L	K	A	T	D	E	L	I	A	A	V	T	A	H	W	R	E	D	F	T	V	L	R	L	H	G	D	C	H	A	G	N	I	L	W	R	D	G	P	M	F	V	D	L	D	D	A	R	N	G	P	A	V	Q	D	L	W	M	L	L	N	G	D	K	A	E	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.																																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	C	L	D	L	A	R	E	L	E	F	L	R	A	H	I	S	L	S	K	S	P	V	T	F	C	H	N	D	L	Q	E	G	N	I	L	L	P	K	R	L	V	L	I	D	F	E	Y	A	S	Y	N	Y	R	A	F	D	F	A	N	H	F	I	E	W	T	I	D	Y	D	I	D	E	A	P	F	Y	K	I
Template Known Secondary structure																			T	T										S				G	G	G													T	T																	T	T						S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
								241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.										260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	Q	R	M	Q	L	E	T	I	I	E	A	Y	E	E	F	S	E	F	D	.	.	.	.	.	.	.	.	.	T	A	E	I	G	L	I	E	P	L	R	A	M	R	L	V	Y	Y	L	A	W	L	M	R	R	W	A	D	P	A	F	P	K	N	F	P	W	L	T	G	E	D	Y	W	L	R
Query Conservation		.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.																																												.	.
Template Conservation																																																																															.	.
Template Sequence		Q	T	E	N	F	P	E	N	D	Q	M	L	E	F	F	L	N	Y	L	R	E	Q	G	N	T	R	E	N	E	L	Y	K	K	S	E	D	L	V	Q	E	T	L	P	F	V	P	V	S	H	F	F	W	G	V	W	G	L	L	Q	V	E	L	S	P	V	G	F	G	F	A	D	Y	G	R	D	R	L	.	.	S
Template Known Secondary structure			G	G	G	S																		T		S		G	G	G													G	G	G																					S	S	S											.	.
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.			.
		306	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	A	T	F	I	E	Q	A	K	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	F	K	H	K	Q	L	L	K	N	L
Template Known Secondary structure						T						T	T
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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