 |
Job Description | P0A8D0 | Confidence | 52.28% | Date | Thu Jan 5 11:07:30 GMT 2012 |
Rank | 43 | Aligned Residues | 58 |
% Identity | 17% | Template | d1qzxa1 |
SCOP info | Four-helical up-and-down bundle
| Domain of the SRP/SRP receptor G-proteins
| Domain of the SRP/SRP receptor G-proteins
|
Resolution | 4.00 |
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | E | E | K | L | R | S | G | M | L | R | A | L | E | K | R | P | V | S | S | D | D | V | E | M | A | I | N | H | I | K | S | Q | L | R | A | T | G | E | R | E | . |
. |
V | P | S | K | M | I | G | N | L | V | M | E | Q | L | K | K | L |
Query Conservation |   |
|   |   |
|
|   |   |
|
|   |
|
|   |   |
|
|   |
|   |   |
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
| . | . |
|   |
|
|
|
|
|
|   |
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |
|
|   |   |
|
|
|   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |
|
Template Sequence |   |
A | V | D | E | F | I | K | D | L | Q | K | S | L | I | S | S | D | V | N | V | K | L | V | F | S | L | T | A | K | I | K | E | R | L | N | K | E | K | P | P | S | V | L | E | R | K | E | W | F | I | S | I | V | Y | D | E | L | S | K | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
|
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|