 |
| Job Description | P0A8D0 | | Confidence | 22.83% | Date | Thu Jan 5 11:07:30 GMT 2012 |
| Rank | 171 | Aligned Residues | 25 |
| % Identity | 32% | Template | c2zetD_ |
| PDB info |
PDB header:signaling protein | Chain: D: PDB Molecule:melanophilin; |
PDBTitle: crystal structure of the small gtpase rab27b complexed with2 the slp homology domain of slac2-a/melanophilin
|
| Resolution | 3.00 Å |
|
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
C | P | F | C | F | A | V | D | T | K | V | I | D | S | R | L | V | G | E | G | S | S | V | R | R | R | R | Q | C | L | V | C | N | E | R | F |
| Query Conservation |   |
|
|   |
|   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |
|   |   |
|
|
| Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
| Template Sequence |   |
C | A | R | C | L | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | Y | R | L | L | L | N | S | R | R | Q | C | L | E | C | S | L | F | V |
| Template Known Secondary structure |   |
| S | S | S |
|
| . | . | . | . | . | . | . | . | . | . | . | B | G | G | G |
| S | S |
|
|  |  |
| T | T | T |
|
|  |  |
| Template Predicted Secondary structure |   |
|  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
64 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|