Job Description P0A8D0 Confidence 29.15% Date Thu Jan 5 11:07:30 GMT 2012 Rank 121 Aligned Residues 23 % Identity 30% Template c2iykB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the upf2-interacting domain of2 nonsense mediated mrna decay factor upf1 Resolution 2.95 Å

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		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		M	H	C	P	F	C	F	.	A	V	D	T	K	V	I	D	S	R	L	V	G	E	G	S	S	V	R	R	R	R	Q	C	L	V	C	N	E	R	F
Query Conservation									.
Alig confidence									.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	C	S	Y	C	G	I	H	D	P	A	C	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	C	N	T	S	K	K	W	F
Template Known Secondary structure		T	S		T	T	T					T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.																.	.	.	.	30	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions