Job Description P0A8D0 Confidence 62.56% Date Thu Jan 5 11:07:30 GMT 2012 Rank 36 Aligned Residues 24 % Identity 33% Template c1s1i9_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:60s ribosomal protein l43; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. Resolution 11.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		H	C	P	F	C	F	A	V	D	T	K	V	I	D	S	R	L	V	G	E	G	S	S	V	R	R	R	R	.	.	.	.	Q	C	L	V	C	N	E	R	F	T
Query Conservation																														.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	C	S	F	C	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	V	K	R	G	A	A	G	I	W	T	C	S	C	C	K	K	T	V	A
Template Known Secondary structure				T	T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						T	T	T					S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.															.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions