Job Description P0AAN3 Confidence 99.46% Date Thu Jan 5 11:13:21 GMT 2012 Rank 47 Aligned Residues 166 % Identity 23% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																	.																							.	.	.	.
Query SS confidence																																	.																							.	.	.	.
Query Sequence		A	R	K	Q	L	V	L	N	L	V	S	S	P	G	S	G	K	T	T	L	L	T	E	T	L	M	R	L	K	D	S	.	V	P	C	A	V	I	E	G	D	Q	Q	T	V	N	D	A	A	R	I	R	A	T	.	.	.	.	G	T	P	A	I	Q	V	N	T	G	K	G	C	H	L	D	A	Q	M	I	A	D
Query Conservation																																	.																							.	.	.	.
Alig confidence																																	.																							.	.	.	.												.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	.	.	.	.	A	A	T	V	L	S	K
Template Known Secondary structure		S	S	S										T	T	S																T	T											S																T											.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		A	A	P	R	L	P	L	D	D	N	G	I	L	F	I	E	N	V	G	N	L	V	C	P	A	S	F	D	L	G	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	V	A	V	L	S	V	T	E	G	E	D	K	P	L	K	Y	P	H	M	F	A	A	A	S	L	.	.	M	L
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation																					.	.
Template Sequence		A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	.	.	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I	T	G	L	I
Template Known Secondary structure									T	T		S									.	.		S	S																		T	T	S	T	T			S								G	G	G	G	G	G	G											T
Template Predicted Secondary structure																					.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	K	V	D	L	L	P	Y	L	N	F	D	V	E	K	C	I	A	C	A	R	E	V	N	P	E	I	E	I	I	L	I	S	A	T	S	G	E	G	M	D	Q	W
Query Conservation
Alig confidence																						.	.	.	.	.	.										.	.
Template Conservation																						.	.	.	.	.	.										.	.
Template Sequence		L	T	K	L	D	G	S	A	R	G	G	C	V	V	S	V	V	E	E	L	.	.	.	.	.	.	G	I	P	V	K	F	I	G	V	.	.	G	E	A	V	E	D	L
Template Known Secondary structure						S	S		S		T											.	.	.	.	.	.										.	.	S	S	S	G	G	G
Template Predicted Secondary structure																						.	.	.	.	.	.										.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.							.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions