47 c3b9qA_ Probab=99.46   E-value=6.8e-12  Score=91.78  Aligned_columns=166  Identities=23%

Q ss_pred             HCCCEEEEEECCCCCCHHHHHHHHHHHHCCC-CCEEEEECCCCCCHHHHHHHHC----CCEEEEECCCCCCCCCHHHHHH
Q ss_conf             6497699985598888899999999862036-8529996144670389999855----9628997688757642689999
Q batch____       101 ARKQLVLNLVSSPGSGKTTLLTETLMRLKDS-VPCAVIEGDQQTVNDAARIRAT----GTPAIQVNTGKGCHLDAQMIAD  175 (290)
Q Consensus       101 ~~~~~~l~l~g~PGaGKTTLL~~ll~~l~~~-~~vaVI~~d~~t~~Da~~i~~~----G~~v~~i~Tgg~c~~~a~~v~~  175 (290)
                      .....++.|+|.||+||||++-+|...++.. .++++|..|....--.+.+...    |+++....++.    +.....+
T Consensus        95 ~~~~~vi~~vG~~G~GKTTt~aklA~~~~~~g~~v~li~~Dt~R~gA~eQL~~~a~~~gv~~~~~~~~~----~~~~~~~  170 (298)
T c3b9qA_          95 FRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEKAK----AATVLSK  170 (298)
T ss_dssp             SSSCEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEECCCCSCHHHHHHHHHHHHHHTCEEECCCCCC----HHHHHHH
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCC----HHHHHHH
T ss_conf             689769999728887655699999999996799179985687674689999999887398089728988----7999999


Q ss_pred             HHHHHHHCCCCEEEEECCCCCCCCHHHHHHCC-----------------EEEEEECCCCCCCHHHHHHHHHCCCCE--EE
Q ss_conf             99973342996999818765333012334247-----------------579997422242006766676345888--99
Q batch____       176 AAPRLPLDDNGILFIENVGNLVCPASFDLGEK-----------------HKVAVLSVTEGEDKPLKYPHMFAAASL--ML  236 (290)
Q Consensus       176 al~~l~~~~~d~l~IE~vG~lv~pa~~~lg~~-----------------~~v~v~~v~eg~d~~~k~~~~~~~adv--iv  236 (290)
                      +++.....++|+++||+.|  ..|....+...                 .+++|+|++.+.+........++...+  +|
T Consensus       171 ~~~~~~~~~~D~IlIDTaG--r~~~~~~~~~el~~~~~~~~~~~~~~p~~~~LVl~at~~~~~~~~~~~~~~~~~~~~~I  248 (298)
T c3b9qA_         171 AVKRGKEEGYDVVLCDTSG--RLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGITGLI  248 (298)
T ss_dssp             HHHHHHHTTCSEEEECCCC--CSSCCHHHHHHHHHHHHHHHTTSTTCCSEEEEEEEGGGGGGGHHHHHHHHHHTCCCEEE
T ss_pred             HHHHHHHCCCCEEEECCCC--CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEE
T ss_conf             9999996799799981888--88775799999999999863034568852899940677579999999986228997699


Q ss_pred             EECHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH
Q ss_conf             97312156410008999999998489980999827888899999
Q batch____       237 LNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQW  280 (290)
Q Consensus       237 lNK~DL~~~~~~d~~~~~~~~~~~np~~~V~~vSA~tGeG~~~l  280 (290)
                      +||.|-......-+....+.      ..||.+++.  |++++++
T Consensus       249 lTKlDet~~~G~~l~~~~~~------~~Pi~~i~~--Gq~v~Dl  284 (298)
T c3b9qA_         249 LTKLDGSARGGCVVSVVEEL------GIPVKFIGV--GEAVEDL  284 (298)
T ss_dssp             EECCSSCSCTHHHHHHHHHH------CCCEEEEEC--SSSGGGE
T ss_pred             EECCCCCCCHHHHHHHHHHH------CCCEEEEEC--CCCCCCC
T ss_conf             96544788368999999983------898899956--9986664