Return to main results Retrieve Phyre Job Id

Job DescriptionQ2EEU2
Confidence46.21%DateThu Jan 5 12:33:57 GMT 2012
Rank6Aligned Residues31
% Identity19%Templatec2e1nA_
PDB info PDB header:circadian clock proteinChain: A: PDB Molecule:pex; PDBTitle: crystal structure of the cyanobacterium circadian clock modifier pex
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.. ..... ..70.........
Predicted Secondary structure 
.....




....
Query SS confidence 













. . . . .




. . . .











Query Sequence  AVFKKLKTKKLIKS. . . . . VNGQP. . . . YRINTTELNKVR
Query Conservation 


  

 



 
.....  


....



  
    
Alig confidence 













.....




....











Template Conservation 
 
 


  
 
 
        
  

 
 

  

  
 
Template Sequence  TALKFLEDEQIISGYWKKVEGRGRPRRMYQLAQANDDRSR
Template Known Secondary structure  TTS

TT
SS
S
S

Template Predicted Secondary structure 













Template SS confidence 







































   83......90.........100.........110.........120..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions