Job Description P46144 Confidence 100.00% Date Thu Jan 5 12:04:11 GMT 2012 Rank 2 Aligned Residues 198 % Identity 31% Template d2pjqa1 SCOP info HD-domain/PDEase-like HD-domain/PDEase-like HD domain Resolution 2.80

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	L	Q	H	W	Q	A	Q	F	E	N	W	L	K	N	H	H	Q	H	Q	D	A	A	H	D	V	C	H	F	R	R	V	W	A	T	A	Q	K	L	A	A	D	D	D	V	D	M	L	V	I	L	T	A	C	Y	F	H	D	I	V	S	L	A	K	N	H	P	Q	R	Q	R	S	S	I	L	A	A	E	E
Query Conservation
Alig confidence				.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	.	E	T	Q	L	T	A	I	Q	T	Y	A	L	Q	K	L	A	H	D	H	S	G	H	G	R	D	H	L	Q	R	V	N	R	L	A	R	R	L	A	K	D	E	G	A	N	L	N	L	T	L	A	A	A	W	L	H	D	V	I	D	A	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Template Known Secondary structure				.													T	S	S	T	T			S	S		S																			T																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.															.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		T	R	R	L	L	R	E	E	F	E	Q	F	P	A	E	K	I	E	A	V	C	H	A	I	A	A	H	S	F	S	.	.	.	A	Q	I	A	P	L	T	T	E	A	K	I	V	Q	D	A	D	R	L	E	A	L	G	A	I	G	L	A	R	V	F	A	V	S	G	A	L	G	V	A	L	F	D	G	E	D	P
Query Conservation																																.	.	.
Alig confidence									.	.																						.	.	.
Template Conservation									.	.
Template Sequence		L	I	V	Q	L	N	A	.	.	Q	N	V	T	A	D	D	Q	T	A	I	F	A	I	I	D	H	X	S	F	S	K	S	F	N	G	P	Q	K	L	S	L	E	G	Q	V	V	Q	D	A	D	R	L	D	A	I	G	A	I	G	I	A	R	A	L	Y	Y	S	G	H	V	G	E	K	I	Y	D	P	A	I	A
Template Known Secondary structure								T	.	.	T	T														T	S			T	G	G	G	G	G							S												T	T	S																T			S			T	T	S
Template Predicted Secondary structure									.	.
Template SS confidence
		76	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		158	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		F	A	Q	H	R	P	L	D	D	K	R	.	.	.	.	Y	A	L	D	H	F	Q	T	K	L	L	K	L	P	Q	T	M	Q	T	A	R	G	K	Q	L	A	Q	H	N	A	H	F	L	V	E	F	M	A	K	L	S	A	E	L	A	G	E
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		P	R	E	H	X	T	R	E	Q	Y	R	H	Q	P	G	T	A	I	N	H	F	Y	E	K	L	F	K	L	A	A	L	X	N	T	D	T	A	K	A	L	A	A	H	R	T	A	V	X	H	E	F	V	D	Q	F	K	A	E	W	T	A	D
Template Known Secondary structure				S	S									S				T	T						T	G	G	G							S																											T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions