Return to main results Retrieve Phyre Job Id

Job DescriptionP46144
Confidence98.61%DateThu Jan 5 12:04:11 GMT 2012
Rank15Aligned Residues119
% Identity21%Templated1ynba1
SCOP infoHD-domain/PDEase-like HD-domain/PDEase-like HD domain
Resolution1.76

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40...... ...50.........60.........70.........80.........90.........100....
Predicted Secondary structure 


...
















Query SS confidence 


















. . .

























































Query Sequence  CHFRRVWATAQKLAADDDV. . . DMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCHAI
Query Conservation   
  

   
  

  
  ...
  

 








                
      
           
  
  

Alig confidence 


















...




























..............













.
Template Conservation 


 


 

  

        
  
    

 


 
   


    
  ..............    
    
    .
Template Sequence  EHNFRAAIIAFILALKSGESVEKACKAATAALFHDLHEARTMDLHKIARRY. . . . . . . . . . . . . . VSCDEEGAREEQLS.
Template Known Secondary structure  TT

TTTT



TTGGGT..............



TT.
Template Predicted Secondary structure 










..............



.
Template SS confidence 















































































   41........50.........60.........70.........80.........90. ........100.....
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  AAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDDKRYALDHFQTKLLKLPQT
Query Conservation    


     
 


  

















 
   
                         
 

 


  
   
Alig confidence  ....























.....


















..........................

Template Conservation  ....  


   
 

  

  



 
.....


 


            ..........................  
Template Sequence  . . . . WMESKPDFSDVEVYVSDADKLELA. . . . . FQGVEYSQQVSYAIRFAEN. . . . . . . . . . . . . . . . . . . . . . . . . . VE
Template Known Secondary structure  ....T
SS



GGG.....TTT
GGGGGGGSS..........................

Template Predicted Secondary structure  ....






.....






..........................
Template SS confidence 















































































   106...110.........120......... 130.........140........ .150
 
   185....190......
Predicted Secondary structure 


Query SS confidence 











Query Sequence  MQTARGKQLAQH
Query Conservation 
 
  

  
  
Alig confidence 











Template Conservation    
   
 
   
Template Sequence  LKTDAAKEIYRV
Template Known Secondary structure 

S
Template Predicted Secondary structure 

Template SS confidence 











   151........160..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions