Job Description P46144 Confidence 98.11% Date Thu Jan 5 12:04:11 GMT 2012 Rank 25 Aligned Residues 118 % Identity 18% Template c3u1nC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:sam domain and hd domain-containing protein 1; PDBTitle: structure of the catalytic core of human samhd1 Resolution 3.10 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.											.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.													.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	C	H	F	R	R	V	W	A	T	A	Q	K	L	A	A	D	D	.	.	.	.	.	.	.	.	.	.	D	V	D	M	L	V	I	L	T	A	C	Y	F	H	D	I	V	S	L	A	K	N	H	P	Q	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	R	S	S	I	L	A	A	E	E	T	R	R	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	H	S	L	G	V	G	Y	L	A	G	C	L	V	H	A	L	G	E	K	Q	P	E	L	Q	I	S	E	R	D	V	L	C	V	Q	I	A	G	L	C	H	D	L	G	H	G	P	F	S	H	X	F	D	G	R	F	I	P	L	A	R	P	E	V	K	W	T	H	E	Q	G	S	V	X	X	F	E	H	L
Template Known Secondary structure																								G	G	G																	T	T	T	T		B	T	T	B						T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		85	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.											.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	E	E	F	E	Q	.	.	.	.	.	.	.	.	F	P	A	E	K	I	E	A	V	C	H	A	I	A	A	H	S	F	S	A	Q	I	A	P	L	T	T	E	A	K	I	V	Q	D	.	.	.	.	.	.	.	.	.	.	A	D	R	L	E	A	L	G	A	I	G	L	A	R	V	F	A	V	S	G	A
Query Conservation									.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		I	N	S	N	G	I	K	P	V	X	E	Q	Y	G	L	I	P	E	E	D	I	C	F	I	K	E	Q	I	V	G	P	L	E	L	W	P	Y	K	G	R	P	E	N	K	S	F	L	Y	E	I	V	S	N	K	R	N	G	I	D	V	D	K	W	D	Y	F	.	.	.	.	.	A	R	D	C	H	H	L	G	I
Template Known Secondary structure					T	T								T	T																								S	S	S		G	G	G	G	G	G	G	G	S	S			T	T	T	S										.	.	.	.	.								T
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310						.	.	.	.	.	.	.	.	.
		147	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		326	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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