Job Description P46144 Confidence 97.97% Date Thu Jan 5 12:04:11 GMT 2012 Rank 27 Aligned Residues 105 % Identity 19% Template c3hc1A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized hdod domain protein; PDBTitle: crystal structure of hdod domain protein with unknown function2 (np_953345.1) from geobacter sulfurreducens at 1.90 a resolution Resolution 1.90 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																							.	.	.	80	.	.	.
Predicted Secondary structure																					.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	C	H	F	R	R	V	W	A	T	A	Q	K	L	A	A	D	D	D	.	V	D	M	L	V	I	L	T	A	C	Y	F	H	D	I	V	S	L	A	K	N	H	P	Q	R	Q	R	S	S	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	E	E	T	R	R
Query Conservation																					.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	A	H	S	L	G	V	A	R	I	A	K	L	I	A	E	R	T	G	F	L	N	P	V	N	V	Y	V	A	G	L	L	H	D	V	G	E	V	F	I	N	F	F	R	G	K	E	F	S	Q	V	V	T	L	V	D	E	E	K	I	T	F	G	Q	A	E	E	R	L	F	G	T	S	H	C	E	V	G	F	A
Template Known Secondary structure																			T	T		S											T	T	T										S																											S	S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	R	E	E	F	E	Q	F	P	A	E	K	I	E	A	V	C	H	A	I	A	A	H	S	F	S	A	Q	I	A	P	L	T	T	E	A	K	I	V	Q	D	A	D	R	L	E	A	L	G	A	I	G
Query Conservation
Alig confidence						.	.														.	.	.
Template Conservation						.	.														.	.	.
Template Sequence		L	A	K	R	.	.	W	S	L	N	E	F	I	C	D	T	I	L	Y	.	.	.	H	H	D	I	E	A	V	P	Y	K	Q	A	A	I	V	A	X	V	A	F	A	D	E	Y	C	T	L	R	R	L	G
Template Known Secondary structure						.	.	T	T												.	.	.	T	T		G	G	G		S	S	S																		T	T	S
Template Predicted Secondary structure						.	.														.	.	.
Template SS confidence
		199	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions