Job Description P46144 Confidence 96.86% Date Thu Jan 5 12:04:11 GMT 2012 Rank 35 Aligned Residues 98 % Identity 19% Template c1vj7B_ PDB info PDB header:hydrolase, transferase Chain: B: PDB Molecule:bifunctional rela/spot; PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis. Resolution 2.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																				.						.	.
Query SS confidence																				.						.	.
Query Sequence		Q	H	W	Q	A	Q	F	E	N	W	L	K	N	H	H	Q	H	Q	.	D	A	A	H	D	.	.	V	C	H	F	R	R	V	W	A	T	A	Q	K	L	A	A	D	D	D	V	D	M	L	V	I	L	T	A	C	Y	F	H	D	I	V	S	L	A	K	N	H	P	Q	R	Q	R	S	S	I	L	A	A	E	E
Query Conservation																				.						.	.
Alig confidence																				.						.	.															.	.	.	.						.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.						.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	F	V	K	K	A	L	D	Y	A	T	A	A	H	F	Y	Q	V	R	K	S	G	E	P	Y	I	V	H	P	I	Q	V	A	G	I	L	A	D	L	.	.	.	.	H	L	D	A	V	.	T	V	A	C	G	F	L	H	D	V	V	E	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T	T		B		T	T	S	S	B	T	T													T	.	.	.	.	T			S		.								T	T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.						.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		T	R	R	L	L	R	E	E	F	E	Q	F	P	A	E	K	I	E	.	.	.	.	.	A	V	C	H	A	I	A	A	H	S	F	S	A	Q	I	A	P	L	T	T	E	A	K	I	V	Q	D	A	D	R	L	E	A	L
Query Conservation																				.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	D	I	T	L	D	N	I	E	F	D	F	G	K	D	V	R	D	I	V	D	G	V	T	K	L	G	K	V	E	S	K	D	I	R	V	I	L	V	K	L	A	D	R	L	H	N	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S																									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions