Return to main results Retrieve Phyre Job Id

Job DescriptionP17888
Confidence99.82%DateWed Jan 25 15:20:40 GMT 2012
Rank78Aligned Residues165
% Identity21%Templated2p6ra3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   195....200.........210.........220.........230.........240.........250.........260.........270. .
Predicted Secondary structure 
























..
Query SS confidence 












































































. .
Query Sequence  ERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA. . P
Query Conservation      
   
  
   
          

 
 





 
    
   
  
  



 
   
  
    
      .. 
Alig confidence 

















....






















































..
Template Conservation      
 
 
  

  
  ....  
 

 







    
                
   
  
              
Template Sequence  KEEELFPPQAEAVEKVFS. . . . GKNLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYVVPLRALAGEKYESFKKWEKIGLR
Template Known Secondary structure 







TT....
S

SSTT

SSTTTTTTT

Template Predicted Secondary structure 






....


























Template SS confidence 















































































   1920.........30...... ...40.........50.........60.........70.........80.........90....
 
   273......280.........290.........300....... ..310.........320.........330.........340.....
Predicted Secondary structure 









.......















Query SS confidence 


































. . . . . . .





































Query Sequence  VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSAL. . . . . . . FTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRA
Query Conservation 
           
             


 
   
.......   
  
 





 
                    
 
Alig confidence 















.......











.......





































Template Conservation                  .......   
 
 
                     
 

 
              
  
    
Template Sequence  IGISTGDYESRDEHLG. . . . . . . DCDIIVTTSEKADSLIRNRASWIKAVSCLVVDEIHLLDSEKRGATLEILVTKMRRMN
Template Known Secondary structure 
SS
B

SS
ST.......T
STT
SGGGG

TTGGGGG
TTT
Template Predicted Secondary structure 










.......























Template SS confidence 















































































   98.100.........110... ......120.........130.........140.........150.........160.........170
 
   346...350........ .360.........370..
Predicted Secondary structure 







.





Query SS confidence 












.













Query Sequence  HSEQIPIILGSAT. PALETLCNVQQKKY
Query Conservation         
  


.
             
Alig confidence 
..









.













Template Conservation   ..    
 



  
   
   
    
Template Sequence  K. . ALRVIGLSATAPNVTEIAEWLDADY
Template Known Secondary structure  T..T



TTTT
Template Predicted Secondary structure 
..










Template SS confidence 



























   171 ........180.........190......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions