Return to main results Retrieve Phyre Job Id

Job DescriptionP17888
Confidence99.68%DateWed Jan 25 15:20:40 GMT 2012
Rank101Aligned Residues115
% Identity21%Templated2j0sa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution2.21

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   485....490.........500.........510.........520.........530.........540.........550.........560....
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  VPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALF
Query Conservation       
 
 
 
 
        
             
  

  
  
   




  
  




 
  






  
 
Alig confidence 















































































Template Conservation   


         
   
                  
      
      


 
     



  
  

  
 
    
Template Sequence  AVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE
Template Known Secondary structure 
SSTT



TTS
TSS

GGGSSS


TTSS

SS
Template Predicted Secondary structure 







































Template SS confidence 















































































   280.........290.........300.........310.........320.........330.........340.........350.........
 
   565....570.........580.........590.........600.........610.
Predicted Secondary structure 


















Query SS confidence 














































Query Sequence  SADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY
Query Conservation    
 

 
       
  




    
 


 
          
  
Alig confidence 
............

































Template Conservation   ............  

 

 

 
  
  
      
      
  
Template Sequence  L. . . . . . . . . . . . YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQ
Template Known Secondary structure  ............TTSSGGG

GGG
Template Predicted Secondary structure  ............










Template SS confidence 














































   360 .........370.........380.........390....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions