 |
Job Description | P17888 | Confidence | 97.92% | Date | Wed Jan 25 15:20:40 GMT 2012 |
Rank | 164 | Aligned Residues | 95 |
% Identity | 16% | Template | d2eyqa4 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Tandem AAA-ATPase domain
|
Resolution | 3.20 |
|
 |
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 280 | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
A | D | T | F | S | A | W | L | L | A | G | V | T | G | S | G | K | T | E | V | Y | L | S | V | L | E | N | V | L | A | Q | G | K | Q | A | L | V | M | V | P | E | I | G | L | T | P | Q | T | I | A | R | F | R | E | R | F | N | A | P | V | E | V | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | S | G | L | N |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |
|   |
|
|   |
|
|
|   |
|   |   |   |
|   |
|   |   |   |   | . | . | . |   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | K | A | G | E | Q | R | L | L | G | E | L | T | G | A | A | C | A | T | L | V | A | E | I | A | E | R | H | . |
. |
. |
A | G | P | V | V | L | I | A | P | D | M | Q | N | A | L | R | L | H | D | E | I | S | Q | F | T | D | Q | M | V | M | N | L | A | D | W | E | T | L | P | Y | D | S | F | S | P | H | Q | D | I |
Template Known Secondary structure |   |
| S | T | T |
| B |
|
| B |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  | S | S | . | . | . | S | S |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| S | S |
|  |  |  |
|
|
|
|
| S |
| T | T |
| S | S |
|
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
  |   |
282 | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | S | E | R | L | S | A | W | L | K | A | K | N | G | E | A | A | I | V | I | G | T | R | S | A | L | F | T | P | F |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |   |
|
|
|   |   |
|
Template Sequence |   |
I | S | S | R | L | S | T | L | Y | Q | L | P | T | M | Q | R | G | V | L | I | V | P | V | N | T | L | M | Q | R | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | G | G | G |
|
| S |  |  |  |  |  |  |  |  |  |  | T | B | B |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|