Return to main results Retrieve Phyre Job Id

Job DescriptionP17888
Confidence99.90%DateWed Jan 25 15:20:40 GMT 2012
Rank60Aligned Residues166
% Identity19%Templated1oywa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   195....200.........210.........220.........230.........240.........250.........260.........270....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  ERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVE
Query Conservation      
   
  
   
          

 
 





 
    
   
  
  



 
   
  
    
       
 
Alig confidence 

















....
























...























.




Template Conservation 
   
   
  

  

 ....





 







    

    ...    
 
 
   
  
        .     
Template Sequence  GYQQFRPGQEEIIDTVLS. . . . GRDCLVVXPTGGGKSLCYQIPALLL. . . NGLTVVVSPLISLXKDQVDQLQAN. GVAAA
Template Known Secondary structure 

SS

TTT....T


S
S...SS
S
T.T

Template Predicted Secondary structure 






....








...






.



Template SS confidence 















































































   22.......30......... 40.........50.........60.... .....70.........80........ .90...
 
   275....280.........290.........300.........310. ........320.........330.........340.......
Predicted Secondary structure 










.......
















Query SS confidence 




































. . . . . . .



































Query Sequence  VLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPF. . . . . . . KNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS
Query Conservation            
             


 
   
   
.......  
 





 
                    
   
Alig confidence 




































.......


















.















Template Conservation                          

  

  
                 



 
       .           
    
Template Sequence  CLNSTQTREQQLEVXTGCRTGQIRLLYIAPERLXLDNFLEHLAHWNPVLLAVDEAHCISQWGH. DFRPEYAALGQLRQRF
Template Known Secondary structure 
TTS
T

S
TSTTTTS
SSGGGG
TTSS.


GGGG
Template Predicted Secondary structure 





















.
Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150...... ...160.........170..
 
   348.350.........360.........
Predicted Secondary structure 








Query SS confidence 





















Query Sequence  EQIPIILGSATPALETLCNVQQ
Query Conservation       
  



          
Alig confidence 





















Template Conservation         



        
  
Template Sequence  PTLPFXALTATADDTTRQDIVR
Template Known Secondary structure  TTS
S


Template Predicted Secondary structure 







Template SS confidence 





















   173......180.........190....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions