Return to main results Retrieve Phyre Job Id

Job DescriptionP17888
Confidence99.97%DateWed Jan 25 15:20:40 GMT 2012
Rank46Aligned Residues171
% Identity27%Templated1gm5a3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain
Resolution3.24

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   196...200.........210........ .220.........230.........240.........250.........260.........270.
Predicted Secondary structure 








..














..
Query SS confidence 






















. .




















































. .
Query Sequence  RLRLNTEQATAVGAIHSAADTFS. . AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA. .
Query Conservation     
   
  
   
        ..  

 
 





 
    
   
  
  



 
   
  
    
      ..
Alig confidence 






















..




















































..
Template Conservation   
 
   
  

  
            

   

 


 

                


   
  
             
Template Sequence  PFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSILAIQHYRRTVESFSKFN
Template Known Secondary structure  SS


SSS





SSSSTS

S
T
SS
Template Predicted Secondary structure 


























Template SS confidence 















































































   366...370.........380.........390.........400.........410.........420.........430.........440.....
 
   272.......280.........290.........300........ .310.........320.........330.........340........
Predicted Secondary structure  .










..


















Query SS confidence  .




































. .







































Query Sequence  . PVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALF. . TPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE
Query Conservation  . 
           
             


 
   
 ..  
  
 





 
                    
    
Alig confidence  .




































..

















...............






Template Conservation                              


 
   
          








  ...............       
Template Sequence  IHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVIIDEQHRFE. . . . . . . . . . . . . . . ALMNKGK
Template Known Secondary structure 



SSS
SS



TT



S


S




...............


SSSS
Template Predicted Secondary structure 






















...............


Template SS confidence 















































































   446...450.........460.........470.........480.........490.........500... ......510
 
   349350.........360.........370.........380.
Predicted Secondary structure 














Query SS confidence 
































Query Sequence  QIPIILGSATPALETLCNVQQKKYRLLRLTRRA
Query Conservation      
  



                 
    
Alig confidence 
































Template Conservation      
 





  

     
      
   
Template Sequence  MVDTLVMSATPIPRSMALAFYGDLDVTVIDEMP
Template Known Secondary structure 


SS


T

SS




Template Predicted Secondary structure 











Template SS confidence 
































   516...520.........530.........540........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions