Return to main results Retrieve Phyre Job Id

Job DescriptionP17888
Confidence94.05%DateWed Jan 25 15:20:40 GMT 2012
Rank325Aligned Residues42
% Identity24%Templatec3qmzA_
PDB info PDB header:motor proteinChain: A: PDB Molecule:cytoplasmic dynein heavy chain; PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain
Resolution6.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   200.........210.........220.........230.........240.
Predicted Secondary structure 











Query SS confidence 









































Query Sequence  NTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV
Query Conservation     
  
   
          

 
 





 
    
   
Alig confidence 









































Template Conservation      
 

 

 
 
  
 














   
  

Template Sequence  GEEFLKKCMQFYYMQKTQQALILVGKAGCGKTATWKTVIDAM
Template Known Secondary structure 

SS




TTSSTT
Template Predicted Secondary structure 









Template SS confidence 









































   2042.......2050.........2060.........2070.........2080...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions