Job Description P17888 Confidence 97.22% Date Wed Jan 25 15:20:40 GMT 2012 Rank 190 Aligned Residues 87 % Identity 25% Template c3pfiB_ PDB info
PDB header: hydrolaseChain: B: PDB Molecule: holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
Resolution 2.69 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
203 . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . .
Predicted Secondary structure
. . . . . . .
Query SS confidence
.
.
.
.
.
.
.
Query Sequence
Q A T A V G A I H S A A D T F .
.
.
.
.
.
.
S A W L L A G V T G S G K T E V Y L S V L E N V L A Q G K Q A L V M V P E I G L T P Q T I A R F R E R F N A P V E V
Query Conservation
. . . . . . .
Alig confidence
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Conservation
. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Sequence
Q E S I K K N L N V F I A A A K K R N E C L D H I L F S G P A G L G K T T L A .
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
N I I S Y E X S A N I K T
Template Known Secondary structure
T T S S T T S S . . . . . . . . . . . . . . . . . . . . . . . . . . . . T T
Template Predicted Secondary structure
. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template SS confidence
31 . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . .
276 . . . 280 . . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . .
Predicted Secondary structure
Query SS confidence
Query Sequence
L H S G L N D S E R L S A W L K A K N G E A A I V I G T R S A L F T P F K N L G V I V I D E E H D S S Y K Q Q E G W R
Query Conservation
Alig confidence
. . . . . . . . . . . . . . . . .
Template Conservation
. . . . . . . . . . . . . . . . .
Template Sequence
T A A P X I E K S G D L A .
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
A I L T N L S E G D I L F I D E I H R L S P A I E E V L Y
Template Known Secondary structure
G G G S S . . . . . . . . . . . . . . . . . T T T S G G G
Template Predicted Secondary structure
. . . . . . . . . . . . . . . . .
Template SS confidence
83 . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
