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Job Description | P17888 | Confidence | 99.55% | Date | Wed Jan 25 15:20:40 GMT 2012 |
Rank | 115 | Aligned Residues | 112 |
% Identity | 27% | Template | c3earA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:hera; |
PDBTitle: novel dimerization motif in the dead box rna helicase hera: form 1,2 partial dimer
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Resolution | 2.30 Å |
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485 | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | P | V | G | L | G | T | E | Q | L | E | Q | T | L | A | P | L | F | P | G | V | P | I | S | R | I | D | R | D | T | T | S | R | K | G | A | L | E | Q | Q | L | A | E | V | H | R | G | G | A | R | I | L | I | G | T | Q | M | L | A | K | G | H | H | F | P | D | V | T | L | V | A | L | L | D | V | D | G | A | L | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | M | V | F | T | R | T | K | A | E | T | E | E | I | A | Q | G | L | L | R | L | G | H | P | A | Q | A | L | H | G | D | L | S | Q | G | E | R | E | R | V | L | G | A | F | R | Q | G | E | V | R | V | L | V | A | T | D | V | A | A | R | G | L | D | I | P | Q | V | D | L | V | V | H | Y | R | L | P | D | R | A | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 |
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565 | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | A | D | F | R | S | A | E | R | F | A | Q | L | Y | T | Q | V | A | G | R | A | G | R | A | G | K | Q | G | E | V | V | L | Q | T | H | H | P | E | H | P | L | L | Q | T | L | L | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | . |
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Y | Q | H | R | S | G | R | T | G | R | . |
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G | G | R | V | V | L | L | Y | G | P | R | E | R | R | D | V | E | A | L | E | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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321 | |
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. | . | . | . | . | . | . | . | 330 | . | |
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. | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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