Job Description P17888 Confidence 98.67% Date Wed Jan 25 15:20:40 GMT 2012 Rank 142 Aligned Residues 129 % Identity 16% Template c3e1sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease v, subunit recd; PDBTitle: structure of an n-terminal truncation of deinococcus radiodurans recd2 Resolution 2.20 Å

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	D	L	A	S	E	T	P	E	F	S	D	W	R	T	N	Y	A	V	S	G	E	R	L	R	L	N	T	E	Q	A	T	A	V	G	A	I	H	S	A	A	D	T	F	S	A	W	L	L	A	G	V	T	G	S	G	K	T	E	V	Y	L	S	V	L	E	N	V	L	A	Q	G	K	Q	A	L	V	M	V
Query Conservation
Alig confidence																																										.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		I	R	T	L	L	A	T	P	P	A	D	A	G	N	D	D	W	A	V	P	K	K	A	R	K	G	L	S	E	E	Q	A	S	V	L	D	Q	L	A	G	.	.	.	.	H	R	L	V	V	L	T	G	G	P	G	T	G	K	S	T	T	T	K	A	V	A	D	L	A	E	S	L	G	L	E	V	G	L	C	A
Template Known Secondary structure								S														T	T	T	T	T	T													T	T	.	.	.	.		S								T	T	S																T	T
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	I	G	L	T	P	Q	T	I	A	R	F	R	E	R	F	N	A	P	V	E	V	L	H	S	G	L	N	D	S	E	R	L	S	A	W	L	K	A	K	N	G	E	A	A	I	V	I	G	T	R	S	A	L	F	T	P	F	K	N	L	G	V	I	V	I	D	E	E	H	D	S	S
Query Conservation
Alig confidence															.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	G	K	A	A	R	R	L	G	E	V	T	.	.	.	.	G	R	T	A	S	T	V	H	R	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	P	Q	G	F	R	H	N	H	L	E	P	A	P	Y	D	L	L	I	V	D	E	V	S	M	M	G
Template Known Secondary structure		S	S												.	.	.	.	T	S									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			S		S	S	S	S			S		S							G	G	G
Template Predicted Secondary structure															.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.					.	.	.	.	.	.	.	.	410	.	.	.																		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions