Job Description P17888 Confidence 100.00% Date Wed Jan 25 15:20:40 GMT 2012 Rank 5 Aligned Residues 327 % Identity 17% Template c2v1xB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent dna helicase q1; PDBTitle: crystal structure of human recq-like dna helicase Resolution 2.00 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	N	T	E	Q	A	T	A	V	G	A	I	H	S	A	A	D	T	F	S	A	W	L	L	A	G	V	T	G	S	G	K	T	E	V	Y	L	S	V	L	E	N	V	L	A	Q	G	K	Q	A	L	V	M	V	P	E	I	G	L	T	P	Q	T	I	A	R	F	R	E	R	F	N	A	P	V	E	V	L	H
Query Conservation
Alig confidence																	.	.	.	.																							.	.	.																												.
Template Conservation																	.	.	.	.																							.	.	.																												.
Template Sequence		K	F	R	P	L	Q	L	E	T	I	N	V	T	M	A	.	.	.	.	G	K	E	V	F	L	V	M	P	T	G	G	G	K	S	L	C	Y	Q	L	P	A	.	.	.	L	C	S	D	G	F	T	L	V	I	C	P	L	I	S	L	M	E	D	Q	L	M	V	L	K	Q	L	.	G	I	S	A	T	M	L	N
Template Known Secondary structure		S			T	T										T	.	.	.	.	T									T	T	S			T								.	.	.		S	S	S	S							S																.	T
Template Predicted Secondary structure																	.	.	.	.																							.	.	.																												.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310													.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	L	N	D	S	E	R	L	S	A	W	L	K	A	.	.	K	N	G	E	A	A	I	V	I	G	T	R	S	A	L	F	T	P	.	.	.	.	.	.	.	.	.	.	.	.	F	K	N	L	G	V	I	V	I	D	E	E	H	D	S	S	Y	K	Q	Q	E	G	W	R	Y	H	A	R	D	L	A	V	Y
Query Conservation																	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																			.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																																						.
Template Sequence		A	S	S	S	K	E	H	V	K	W	V	H	A	E	M	V	N	K	N	S	E	L	K	L	I	Y	V	T	P	E	K	I	A	K	S	K	M	F	M	S	R	L	E	K	A	Y	E	A	R	R	F	T	R	I	A	V	D	E	V	H	C	C	S	Q	W	G	H	D	.	F	R	P	D	Y	K	A	L	G	I	L
Template Known Secondary structure		S	S																T	T										T					S														T	T									T	G	G	G	G	S	T	T	S	T	T	.			G	G	G	G	G	G
Template Predicted Secondary structure																																																																						.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		R	A	H	S	E	Q	I	P	I	I	L	G	S	A	T	P	A	L	E	T	L	C	N	V	Q	Q	.	.	K	K	Y	R	L	L	R	L	T	R	R	A	G	N	A	R	P	A	I	Q	H	V	L	D	L	K	G	Q	K	V	Q	A	G	L	A	P	A	L	I	T	R	M	R	Q	H	L	Q	A	D	N	Q	V
Query Conservation																												.	.
Alig confidence																												.	.																																.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		K	R	Q	F	P	N	A	S	L	I	G	L	T	A	T	A	T	N	H	V	L	T	D	A	Q	K	I	L	C	I	E	K	C	F	T	F	T	A	S	F	N	R	P	N	L	Y	Y	E	V	R	Q	K	P	S	N	T	E	D	F	.	.	.	.	I	E	D	I	V	K	L	I	N	G	R	Y	K	G	Q	S	G
Template Known Secondary structure						T	T	S							S	S													T	T			S											T	T										S	S					.	.	.	.									T	T	T	T	T	T
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300					.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	F	L	N	R	R	G	F	A	P	A	L	L	C	H	D	C	G	W	I	A	E	C	P	R	C	D	H	Y	Y	T	L	H	Q	A	Q	H	H	L	R	C	H	H	C	D	S	Q	R	P	V	P	R	Q	C	P	S	C	G	S	T	H	L	V	P	V	G	L	G	T	E	Q	L	E	Q	T	L	A	P	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	Y	C	F	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	S	E	Q	V	T	V	S
Template Known Secondary structure						S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.																																																																	.	.	.	.	.	330	.	.	.
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	G	V	P	I	S	R	I	D	R	D	T	T	S	R	K	G	A	L	E	Q	Q	L	A	E	V	H	R	G	G	A	R	I	L	I	G	T	Q	M	L	A	K	G	H	H	F	P	D	V	T	L	V	A	L	L	D	V	D	G	A	L	F	S	A	D	F	R	S	A	E	R	F	A	Q	L	Y	T	Q	V
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	N	L	G	I	H	A	G	A	Y	H	A	N	L	E	P	E	D	K	T	T	V	H	R	K	W	S	A	N	E	I	Q	V	V	V	A	T	V	A	F	G	M	G	I	D	K	P	D	V	R	F	V	I	H	H	S	M	S	K	S	M	E	N	.	.	.	.	.	.	.	.	.	.	.	.	Y	Y	Q	E
Template Known Secondary structure					T	T								T	T	S														T	T	S	S	S						T	T	S		T	T				T	T							S	S			S	S				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.													.	.	400	.
		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	A	G	R	A	G	K	Q	G	E	V	V	L	Q	T	H	H	P	E	H	P	L	L	Q	T	L	L	Y	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	R	A	G	R	D	D	M	K	A	D	C	I	L	Y	Y	G	F	G	D	I	F	R	I	S	S	M	V	V	M	E
Template Known Secondary structure			T	T	S		T	T	S	S																				T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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