Job Description P17888 Confidence 94.17% Date Wed Jan 25 15:20:40 GMT 2012 Rank 322 Aligned Residues 114 % Identity 30% Template c2iutA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:dna translocase ftsk; PDBTitle: p. aeruginosa ftsk motor domain, dimeric Resolution 2.25 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.																		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	L	A	G	V	T	G	S	G	K	T	E	V	Y	L	S	V	L	E	N	V	L	A	Q	G	K	.	.	.	.	Q	A	L	V	M	V	P	E	I	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	Q	T	I	A	R	F	R	E	R	F	N	A	P	V	E	V	L	H	S
Query Conservation																													.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		L	L	V	A	G	T	T	G	S	G	K	S	V	G	V	N	A	M	L	L	S	I	L	F	K	S	T	P	S	E	A	R	L	I	M	I	D	P	K	M	L	E	L	S	I	Y	E	G	I	P	H	L	L	C	P	V	V	T	D	M	K	E	A	A	N	A	L	R	W	S	V	A	E	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	S	S														T	T			T	T	T								S	S	S					T	T	T	T		T	T	B	S	S	S		B																	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.																																							.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	N	D	S	E	R	L	S	A	W	L	K	A	K	N	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	I	V	I	G	T	R	S	A	L	F	T	P	F	K	N	L	G	V	I	V	I	D
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	M	E	R	R	Y	R	L	M	A	A	M	G	V	R	N	L	A	G	F	N	R	K	V	K	D	A	E	E	A	G	T	P	L	T	D	P	L	F	R	R	E	S	P	D	D	E	P	P	Q	L	S	T	L	P	T	I	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	D
Template Known Secondary structure		.	.	.												T		S	S														T	T				B		T	T					S	T	T					B										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure		.	.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.																	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	H	D	S	S	Y	K	Q	Q	E	G	W	R	Y	H	A	R	D	L	A	V	Y	R	A	H	S	E	Q	I	P	I	I	L	G	S	A	T	P	A
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		E	F	A	D	M	M	M	I	V	G	K	K	V	E	E	L	I	A	R	I	A	Q	.	K	A	R	A	A	G	I	H	L	I	L	A	T	Q	R	P	S
Template Known Secondary structure				T	T					T														.			T	T	T	T								S
Template Predicted Secondary structure																								.
Template SS confidence
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.		.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions