Job Description P17888 Confidence 99.82% Date Wed Jan 25 15:20:40 GMT 2012 Rank 75 Aligned Residues 188 % Identity 21% Template c2gxqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:heat resistant rna dependent atpase; PDBTitle: hera n-terminal domain in complex with amp, crystal form 1 Resolution 1.20 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	L	E	F	N	D	A	A	L	Q	A	L	R	K	K	G	L	C	D	L	A	S	E	T	P	E	F	S	D	W	R	T	N	Y	A	V	S	G	E	R	L	R	L	N	T	E	Q	A	T	A	V	G	A	I	H	S	A	A	D	T	F	S	A	W	L	L	A	G	V	T	G	S	G	K	T	E	V	Y	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Sequence		K	D	F	P	L	K	P	E	I	L	E	A	L	H	G	R	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	P	T	P	I	Q	A	A	A	L	P	L	A	L	E	.	.	.	.	G	K	D	L	I	G	Q	A	R	T	G	T	G	K	T	L	A	F	A
Template Known Secondary structure		G	G	S													T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S														T	.	.	.	.	T									T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.																								.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.							.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		S	V	L	E	N	V	L	A	Q	.	.	.	.	.	.	G	K	Q	A	L	V	M	V	P	E	I	G	L	T	P	Q	T	I	A	R	F	R	E	R	F	N	A	P	V	E	V	L	H	S	G	L	N	D	S	E	R	L	S	A	W	L	K	A	K	N	G	E	A	A	I	V	I	G	T	R	S	A	L	F	T
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																																																	.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		L	P	I	A	E	R	L	A	P	S	Q	E	R	G	R	K	P	R	A	L	V	L	T	P	T	R	E	L	A	L	Q	V	A	S	E	L	T	A	V	A	P	H	L	K	V	V	A	V	Y	G	G	T	G	Y	G	K	Q	K	E	A	L	L	R	.	.	.	G	A	D	A	V	V	A	T	P	G	R	A	L	D
Template Known Secondary structure														T	T				S						S	S																T	T	S							S	S	S		S										.	.	.			S
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.
		310								.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	.	F	K	N	L	G	V	I	V	I	D	E	E	H	D	S	S	Y	K	Q	Q	E	G	W	R	Y	H	A	R	D	L	A	V	Y	R	A	H	S	E	Q	I	P	I	I	L	G	S	A	T	P	A	L	E	T	L	C	N	V	Q	Q	K	K	Y	R	L	L	R	L	T
Query Conservation			.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.																	.	.	.												.	.
Template Conservation																										.	.	.												.	.
Template Sequence		Y	L	R	Q	G	V	L	D	L	S	R	V	E	V	A	V	L	D	E	A	D	E	M	L	.	.	.	S	M	G	F	E	E	E	V	E	A	L	.	.	L	S	A	T	P	P	S	R	Q	T	L	L	F	S	A	T	L	P	S	W	A	K	R	L	A	E	R	Y	M	K	N	P	V	L	I	N
Template Known Secondary structure						T	S	S			T	T		S						S						.	.	.		T	T									.	.			T	S		T	T	S							S	S														S	S
Template Predicted Secondary structure																										.	.	.												.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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