 |
Job Description | P17888 | Confidence | 89.38% | Date | Wed Jan 25 15:20:40 GMT 2012 |
Rank | 401 | Aligned Residues | 59 |
% Identity | 22% | Template | c1w5sB_ |
PDB info |
PDB header:replication | Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2; |
PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form)
|
Resolution | 2.4 Å |
|
 |
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | S | D | W | R | T | N | Y | A | V | S | G | E | R | L | R | L | N | T | E | Q | A | T | A | V | G | A | I | H | S | A | A | . |
. |
. |
. |
. |
. |
. |
. |
D | T | F | S | A | W | L | L | A | G | V | T | G | S | G | K | T | E | V | Y | L | S | V | L | E | N | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|
Template Sequence |   |
K | D | R | R | V | F | D | E | N | Y | I | P | P | E | L | R | V | R | R | G | E | A | E | A | L | A | R | I | Y | L | N | R | L | L | S | G | A | G | L | S | D | V | N | M | I | Y | G | S | I | G | R | V | G | I | G | K | T | T | L | A | K | F | T | V | K | R | V |
Template Known Secondary structure |   |
S |
| G | G | G | G | S | T | T |
|
|
| S | S |
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |
|
|  |  |  |  |  |  |
| T | T |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|