Job Description P17888 Confidence 96.11% Date Wed Jan 25 15:20:40 GMT 2012 Rank 248 Aligned Residues 140 % Identity 19% Template c1t4gA_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: atpase in complex with amp-pnp Resolution 2.00 Å

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		205	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.																	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure										.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	V	G	A	I	H	S	.	A	A	D	T	F	S	A	W	L	L	A	G	V	T	G	S	G	K	T	E	V	Y	L	S	V	L	E	N	V	L	A	Q	G	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	V	M	V	P	E	I	G	L	T	P	Q	T	I	A	R	F	R	E
Query Conservation										.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	L	D	S	V	L	G	G	G	L	E	S	Q	S	V	T	E	F	A	G	V	F	G	S	G	K	T	Q	I	M	H	Q	S	C	V	N	L	Q	N	P	E	F	L	F	Y	D	E	E	A	V	S	K	G	E	V	A	Q	P	K	A	V	Y	I	D	T	E	G	T	F	R	P	E	R	I	M	Q	M	A	E
Template Known Secondary structure								T	T	T	S			B	T	S							S	T	T	S	S												T	T		G	G	G					T	T	T	S		G	G	G	G	S	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		268	.	270	.	.							.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320										.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure							.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	N	A	P	.	.	.	.	.	.	V	E	V	L	H	S	G	L	N	D	S	E	R	L	S	A	W	L	K	A	K	N	G	E	A	A	I	V	I	G	T	R	S	A	L	F	T	P	F	K	N	L	G	V	I	V	I	D	.	.	.	.	.	.	.	.	.	E	E	H	D	S	S	Y	K	Q	Q	E	G
Query Conservation							.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	G	I	D	G	Q	T	V	L	D	N	T	F	V	A	R	A	Y	N	S	D	M	Q	M	L	F	A	E	K	I	.	.	.	.	.	.	.	.	.	.	.	.	E	D	L	I	Q	E	G	N	N	I	K	L	V	V	I	D	S	L	T	S	T	F	R	N	E	Y	T	G	R	G	K	L	A	E	R	Q	Q
Template Known Secondary structure				T	S								T							S	S										T		.	.	.	.	.	.	.	.	.	.	.	.						T	T											S	S							S		S	T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.													.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	Y	H	A	R	D	L	A	V	Y	R	A	H	S	E	Q	I	P	I	I	L	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	G	R	H	M	A	T	L	N	K	L	A	D	L	F	N	C	V	V	L	V	T	N
Template Known Secondary structure																	T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions