Return to main results Retrieve Phyre Job Id

Job DescriptionP17888
Confidence94.30%DateWed Jan 25 15:20:40 GMT 2012
Rank319Aligned Residues44
% Identity30%Templatec1sxjA_
PDB info PDB header:replicationChain: A: PDB Molecule:activator 1 95 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   203......210...... ...220.........230.........240.........
Predicted Secondary structure 

...................











Query SS confidence 













. . . . . . . . . . . . . . . . . . .
































Query Sequence  QATAVGAIHSAADT. . . . . . . . . . . . . . . . . . . FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQAL
Query Conservation 
  
   
      ...................    

 
 





 
    
   
  
  

Alig confidence 













...................
























...




Template Conservation      
  
  

  
                   
 







 



 
  




...
  

Template Sequence  NKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQEL. . . GYDIL
Template Known Secondary structure 
TTTT



TTSTTS
S
STTSST...T
Template Predicted Secondary structure 























...


Template SS confidence 

































































   313......320.........330.........340.........350.........360.........370 .....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions