Return to main results Retrieve Phyre Job Id

Job DescriptionP17888
Confidence98.68%DateWed Jan 25 15:20:40 GMT 2012
Rank141Aligned Residues67
% Identity25%Templatec1pjrA_
PDB info PDB header:helicaseChain: A: PDB Molecule:pcra; PDBTitle: structure of dna helicase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240...... ...250.........260.........270
Predicted Secondary structure 
















....



Query SS confidence 
















































. . . .























Query Sequence  RLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGK. . . . QALVMVPEIGLTPQTIARFRERFN
Query Conservation   
   
  
   
          

 
 





 
    
   
  
 .... 



 
   
  
    
     
Alig confidence 











......






























....























Template Conservation   
   
  

  ......     

 







  
   
  

         


 
 

 
 
    

     
Template Sequence  HLNKEQQEAVRT. . . . . . TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLG
Template Known Secondary structure  TS

......
SS

TTS
TT


GGGSSG
Template Predicted Secondary structure 



......
















Template SS confidence 












































































   11........20.. .......30.........40.........50.........60.........70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions