 |
Job Description | P17888 | Confidence | 90.92% | Date | Wed Jan 25 15:20:40 GMT 2012 |
Rank | 374 | Aligned Residues | 38 |
% Identity | 32% | Template | c1cz7C_ |
PDB info |
PDB header:contractile protein | Chain: C: PDB Molecule:microtubule motor protein ncd; |
PDBTitle: the crystal structure of a minus-end directed microtubule2 motor protein ncd reveals variable dimer conformations
|
Resolution | 2.90 Å |
|
  |   |
197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
|
|
|
. | . | . | . | . | . | . | . | . | 220 | . | . | |
. | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  | . |  |
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | L | N | T | E | Q | A | T | A | V | G | A | I | . |
. |
. |
. |
H | S | A | A | D | T | F | S | A | W | L | L | . |
A | G | V | T | G | S | G | K | T | E | V | Y |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |   |
| . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
| . |   |
|   |
|
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
Template Sequence |   |
F | H | P | L | S | S | Q | S | D | I | F | E | M | V | S | P | L | I | Q | S | A | L | D | G | Y | N | I | C | I | F | A | Y | G | Q | T | G | S | G | K | T | Y | T | M |
Template Known Secondary structure |   |
 |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
| S | T | T | S | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
402 | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|