 |
Job Description | P0A786 | Confidence | 94.11% | Date | Thu Jan 5 11:05:04 GMT 2012 |
Rank | 133 | Aligned Residues | 121 |
% Identity | 18% | Template | d1v8ba1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Formate/glycerate dehydrogenases, NAD-domain
|
Resolution | 2.40 |
|
 |
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | T | L | L | D | L | F | T | I | Q | E | T | Q | G | R | L | D | N | L | H | V | A | M | V | G | D | L | K | Y | G | R | T | V | H | S | L | T | Q | A | L | A | K | F | D | G | N | R | F | Y | F | I | A | P | D | A | L | A | M | P | Q | Y | I | L | D | M | L | D | E | K | G | I | A | W | S | L | H | S | S | I | E |
Query Conservation |   |
|   |
|
|
|
|   |
|
|   |
|   |   |
|   |
|   |
|
|   |
|
|   |
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   | . |   |
|   |   |
|   |   |
|   |
|
|
|
|   |
|
|
| . | . | . |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   | . |
|   |   |
|   |   |   |
|   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |
|   |
Template Sequence |   |
H | S | L | P | D | G | L | . |
M | R | A | T | D | F | L | I | S | G | K | I | V | V | I | C | G | . |
. |
. |
Y | G | D | V | G | K | G | C | A | S | S | M | K | G | L | . |
G | A | R | V | Y | I | T | E | I | D | . |
. |
. |
. |
. |
P | I | C | A | I | Q | A | V | M | E | G | F | N | V | . |
. |
. |
V | T | L | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . |  |  |  |  |
|
|
|
| T | T | S |  |  |  |  |  |
| . | . | . |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T |
|  |  |  |  |  |
| S |
| . | . | . | . | . |  |  |  |  |  |  |  |  | T | T | T |
|  |  | . | . | . |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  | . |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | |
. | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | |
|
|
. | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | |
280 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | |
|
|
. | . | . | . |
  |
  |   |
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | M | A | E | V | D | I | L | Y | M | T | R | V | Q | K | E | R | L | D | P | S | E | Y | A | N | V | K | A | Q | F | V | L | R | A | S | D | L | H | N | A | K | A | N | M | K | V | L | H | P | L | P | R | V | D | E | I | A | T | D | V | D | K | T | P | H | A | W |
Query Conservation |   |
|
|   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |
|
Template Sequence |   |
E | I | V | D | K | G | D | F | F | I | T | C | T | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | V | D | V | I | K | L | E | H | L | L | K | M | K | N | N | A | V | V | G | N | I | G | H | F | D | D | E | I | Q | V | N | E | L | F | N | Y | K | G | I |
Template Known Secondary structure |   |
 |  | T | T | T |
| S |  |  |  |  |
|
| S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S | S | S | B |
|  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |
| S | S | T | T | T | S | B |
|  |  |  |  |  | T | S | T | T |
|
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
308 | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|