Job Description P0A786 Confidence 100.00% Date Thu Jan 5 11:05:04 GMT 2012 Rank 23 Aligned Residues 292 % Identity 22% Template c3q98A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarbamylase; PDBTitle: structure of ygew encoded protein from e. coli Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		M	A	N	P	L	Y	Q	K	H	I	I	S	I	N	D	L	S	R	D	D	L	N	L	V	L	A	T	A	A	K	L	K	A	.	.	.	.	N	P	Q	P	E	L	L	K	H	K	V	I	A	S	C	F	F	E	A	S	T	R	T	R	L	S	F	E	T	S	M	H	R	L	G	A	S	V	V	G	F	S	D
Query Conservation																																			.	.	.	.
Alig confidence																																			.	.	.	.																	.	.	.	.	.																		.	.	.	.	.
Template Conservation																																																							.	.	.	.	.																		.	.	.	.	.
Template Sequence		L	T	S	H	L	H	E	K	D	F	L	L	T	W	E	Q	T	P	D	E	L	K	Q	V	L	D	V	A	A	A	L	K	A	L	R	A	E	N	I	S	T	K	V	F	N	S	G	L	G	I	S	V	F	.	.	.	.	.	R	D	R	F	S	Y	A	S	A	L	N	L	L	G	L	A	Q	.	.	.	.	.
Template Known Secondary structure						G	G	G	S					G	G	G	S																					T	T	B						S	S								.	.	.	.	.														T				.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.																		.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.													.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	N	T	S	L	G	K	K	G	E	T	L	A	D	T	I	S	V	I	S	T	Y	V	D	A	I	V	M	R	H	P	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	G	A	A	R	L	A	T	E	F	S	G	N	V	P	V	L	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	F
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation		.	.	.	.																																																					.
Template Sequence		.	.	.	.	Q	D	L	D	H	G	E	T	V	R	E	T	A	N	X	I	S	F	C	A	D	A	I	G	I	R	D	D	X	Y	L	G	A	Y	X	R	E	V	G	A	A	L	D	D	G	Y	K	Q	G	V	L	P	.	Q	R	P	A	L	V	N	L	Q	C	D	I	D	H	P	T	Q	S	X	A	D	L	A
Template Known Secondary structure		.	.	.	.							T	T								T		T	T																													T	T	S		S	.	S										S	S
Template Predicted Secondary structure		.	.	.	.																																																					.
Template SS confidence
						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		145	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210
Predicted Secondary structure									.	.	.											.	.	.	.	.	.	.																																												.	.	.	.
Query SS confidence									.	.	.											.	.	.	.	.	.	.																																												.	.	.	.
Query Sequence		T	I	Q	E	T	Q	G	.	.	.	R	L	D	N	L	H	V	A	M	V	.	.	.	.	.	.	.	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D	A	L	A	M	P	Q	Y	I	L	D	M	L	D	.	.	.	.	E	K	G	I	A	W
Query Conservation									.	.	.											.	.	.	.	.	.	.																																												.	.	.	.
Alig confidence									.	.	.											.	.	.	.	.	.	.			.	.																.																								.	.	.	.
Template Conservation																															.	.																.
Template Sequence		W	L	R	E	H	F	G	S	L	E	N	L	K	G	K	K	I	A	X	T	W	A	Y	S	P	S	Y	G	K	.	.	P	L	S	V	P	Q	G	I	I	G	L	X	T	R	F	.	G	X	D	V	T	L	A	H	P	E	G	Y	D	L	I	P	D	V	V	E	V	A	K	N	N	A	K	A	S	G	G	S	F
Template Known Secondary structure								S	S	S	G	G	G	T	T											S	S				.	.		T											G	G	G	.	T									T	T																			T
Template Predicted Secondary structure																															.	.																.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.					.	.	.	.	.	250	.	.	.	.	.																			.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	H	S	S	I	E	E	V	M	A	E	V	D	I	L	Y	M	T	R	V	Q	K	E	R	L	D	P	S	E	Y	A	N	V	.	.	.	.	K	A	Q	F	V	L	R	A	S	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	A	K	A	N	M	K	V	L	H	P	L
Query Conservation																																				.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	V	T	S	X	E	E	A	F	K	D	A	D	I	V	Y	P	K	S	W	A	P	Y	K	V	X	E	E	R	T	E	L	L	R	A	N	D	H	E	G	L	K	A	L	E	K	Q	C	L	A	Q	N	A	Q	H	K	D	W	H	C	T	E	E	X	X	E	L	T	R	D	G	E	A	L	Y	X	H	C	L
Template Known Secondary structure					S							T	T		S																						T	T																		T	T	T	T			B							T	S	G	G	G								S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		269									270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	.	.	R	V	D	E	I	A	T	D	V	D	K	T	P	H	A	W	Y	F	Q	Q	A	G	N	G	I	F	A	R	Q	A	L	L	A	L	V	L	N	R	D	L	V
Query Conservation			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	D	I	S	G	V	S	C	K	E	G	E	V	T	E	G	V	F	E	K	Y	R	I	A	T	Y	K	E	A	S	W	K	P	Y	I	I	A	A	X	I	L	S	R	K	Y	A	K	P	G
Template Known Secondary structure		S					T	T	T	B	S	S		S																			T															S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions