 |
Job Description | P0A786 | Confidence | 86.20% | Date | Thu Jan 5 11:05:04 GMT 2012 |
Rank | 232 | Aligned Residues | 63 |
% Identity | 24% | Template | c3plnA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:udp-glucose 6-dehydrogenase; |
PDBTitle: crystal structure of klebsiella pneumoniae udp-glucose 6-dehydrogenase2 complexed with udp-glucose
|
Resolution | 1.50 Å |
|
 |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | H | V | A | M | V | G | D | L | K | Y | G | R | T | V | H | S | L | T | Q | A | L | A | K | F | D | G | N | R | F | Y | F | I | A | P | D | A | L | A | M | P | Q | Y | I | L | D | M | L | D | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | G | I | A | W | S | L | H | S | S | I | E | E | V |
Query Conservation |   |
|   |
|
|   |
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|
| . | . | . |
|   |
|
|   |   |   |
|   |   |
|
|   | . | . |
|   |   |
|   | . | . | . | . | . |   |   |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
Template Sequence |   |
M | K | I | T | I | S | G | T | . |
. |
. |
G | Y | V | G | L | S | N | G | V | L | I | A | Q | . |
. |
N | H | E | V | V | . |
. |
. |
. |
. |
A | L | D | I | V | Q | A | K | V | D | M | L | N | Q | K | I | S | P | I | V | D | K | E | I | Q | E | Y | L | A | E | K | P | L | N | F | R | A | T | T | D | K | H | D | A |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| . | . | . | S |  |  |  |  |  |  |  |  |  |  |  | T | . | . | T | S |  |  |  | . | . | . | . | . |  |  |
| S |
|  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  | . | . | . | . | . |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | |
|
|
. | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
|
. | . | . | . | . | |
|
|
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
  |   |
220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | E | V | D | I | L | Y | M |
Query Conservation |   |
  |   |   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|
|
Template Sequence |   |
Y | R | N | A | D | Y | V | I | I |
Template Known Secondary structure |   |
 | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
71 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|