 |
Job Description | P0A786 | Confidence | 85.12% | Date | Thu Jan 5 11:05:04 GMT 2012 |
Rank | 242 | Aligned Residues | 61 |
% Identity | 23% | Template | c3pduF_ |
PDB info |
PDB header:oxidoreductase | Chain: F: PDB Molecule:3-hydroxyisobutyrate dehydrogenase family protein; |
PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter sulfurreducens in complex with nadp+
|
Resolution | 1.89 Å |
|
 |
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | V | A | M | V | G | D | L | K | Y | G | R | T | V | H | S | L | T | Q | A | L | A | K | F | D | G | N | R | F | Y | F | I | A | P | D | A | L | A | M | P | Q | Y | I | L | D | M | L | D | E | K | G | I | A | W | S | L | H | S | S | I | E | E | V | M | A | E | V | D | I | L | Y | M |
Query Conservation |   |
  |
|
|   |
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   | . | . | . |
|   |
|
|   |   |
|
|   |   |
|   |   |   | . |
|   |   |
|   |   |   |
|   | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
| . | . |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |
Template Sequence |   |
T | Y | G | F | L | G | L | . |
. |
. |
G | I | M | G | G | P | M | A | A | N | L | V | R | A | . |
G | F | D | V | T | V | W | N | R | . |
. |
. |
. |
. |
N | P | A | K | C | A | P | L | V | A | L | G | . |
. |
A | R | Q | A | S | S | P | A | E | V | C | A | A | C | D | I | T | I | A |
Template Known Secondary structure |   |
|  |  |  |  |
|
| . | . | . | S | T | T |  |  |  |  |  |  |  |  |  |  | T | . | T |
|
|  |  |  |  |
| S | . | . | . | . | . | S | G | G | G | G |  |  |  |  |  |  | T | . | . |
|  |  |
| S | S |  |  |  |  |  |  |  |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | |
|
|
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | |
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|