Job Description P0A786 Confidence 22.72% Date Thu Jan 5 11:05:04 GMT 2012 Rank 494 Aligned Residues 151 % Identity 17% Template c3pdiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	H	R	L	G	A	S	V	V	G	F	S	D	S	A	N	.	.	.	.	.	.	.	.	.	.	.	T	S	L	G	K	K	G	E	T	L	A	D	T	I	S	V	I	S	T	Y	V	D	A	I	V	M	R	H	P	Q	E	G	A	A	R	L	A	T	E	F	S	G	N	V	P	V	L	N	A	G	D	G	S
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																							.																			.
Template Conservation																																																			.																			.
Template Sequence		I	E	S	F	G	L	R	P	L	L	I	P	D	L	S	G	S	L	D	G	H	L	D	E	N	R	F	N	A	L	T	T	G	G	L	S	V	A	E	L	A	T	A	G	Q	S	V	A	T	.	L	V	V	G	Q	S	L	A	G	A	A	D	A	L	A	E	R	T	.	G	V	P	D	R	R	F	G	M	L	Y
Template Known Secondary structure				T	T	T							S						S	S	S				S	S			T	T			S		S	B						G	G	G	S	S		S			.				S	G	G	G											S	.										S
Template Predicted Secondary structure																																																			.																			.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.
		133	.	.	.	.					.	.	140	.	.	.	.																		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure							.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Q	H	P	T	.	.	.	.	Q	T	L	L	D	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	Q	E	T	Q	G	R	L	D	N	L	H	V	A	M	V	G	D	L	K	Y	G	R	T	V	H	S	L	T	Q	A	L	A	K	F	D	G	N	R	F	Y	F	I	A	P	D
Query Conservation							.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.															.
Template Conservation																																																						.	.	.															.
Template Sequence		G	L	D	A	V	D	A	W	L	M	A	L	A	E	I	S	G	N	P	V	P	D	R	Y	K	R	Q	R	A	Q	L	Q	D	A	M	L	D	T	H	F	M	L	S	S	A	R	T	A	I	A	A	D	.	.	.	P	D	L	L	L	G	F	D	A	L	L	R	S	M	.	G	A	H	T	V	A	A	V	V	P
Template Known Secondary structure																		S	S																									T	T									.	.	.													T	T	.	T									S
Template Predicted Secondary structure																																																						.	.	.															.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.
		192	.	.	.	.															.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	A	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	I	L	D	M	L	D	E	K	G	I	A	W	S	L	H	S	S	I	E	E	V	M
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	A	A	A	L	V	D	S	P	L	P	S	V	R	V	G	D	L	E	D	L	E	H	A	A	R	A	G	Q	A	Q	L	V	I	G	N	S	H	A	L	A	S
Template Known Secondary structure		S			S			T	T	T	T	S	S					S													T		S						T	T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions